Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_3766 |
Symbol | |
ID | 8087144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 4369810 |
End bp | 4371309 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644837851 |
Product | sodium/proline symporter |
Protein accession | YP_002989342 |
Protein GI | 242241161 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.525061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGATGA TGAGCACACC GATGCTGGTA ACATTTCTGG TGTACATCTT CGGGATGGTC CTGATCGGCC TGTTTGCCTA CCGCGCCACT GACAATTTCA GCGACTATAT CCTGGGCGGC CGCCGCATGG GCAGCATTGT CACCGCCCTG TCCGCCGGCG CTTCCGACAT GAGCGGCTGG CTGTTGATGG GCCTGCCGGG CGCCGTGTTT CTGTCGGGGA TTTCTGAAAG TTGGATTGCC ATCGGCCTGA CGCTGGGCGC CTATCTGAAC TGGAAATGGG TAGCAGGACG CCTGCGCGTG CACACTGAAG TCAACCATAA CGCGTTGACA TTACCGGACT ATTTCAGCCA TCGCTTTGAT GATCAAAGCA AACTGCTGCG CGTGATTTCC GCACTGGTGA TCCTGGTGTT CTTCACCATT TATTGCGCAT CCGGCATCGT AGCGGGCGCC CGGTTGTTTG AAAGTACATT CGGCCTCAGC TACAACACCG CATTGTGGGC CGGCGCCCTC GCGACTATCG CTTACACTTT TATCGGCGGT TATCTGGCCG TCAGCTGGAC CGATACCGTC CAGGCCAGCC TGATGATCTT CGCGCTGATT CTGACGCCGG TTATCGTCAT CCTCTCCGTC GGCGGCATTG CGCCGTCGCT GAGCGTGATT GAGGCTAAAA ACCTGTCCAA TTTGGATATG TTCCGCGGGC TGGATCTGGT GGCCATCCTT TCGCTGATGG GCTGGGGTCT GGGTTATTTC GGGCAACCGC ACATTCTGGC GCGTTTTATG GCGGCCGACT CGCATCACAC CATCCATAAC GCCCGCCGCA TCAGCATGAT CTGGATGGTG CTCTGTCTGG CGGGCGCCGT GACCGTCGGC TTTTTCGGCA TCGCCTACTT CACCCAAAAC CCGGAACAGG CCGGCAATGT GTCGCAAAAC GGCGAGCGCG TCTTTATCGA ACTGGCCCGG CTGCTGTTCA ACCCGTGGGT CGCCGGCATA CTGCTGTCCG CTATTTTAGC GGCGGTGATG AGCACCCTAA GCTGCCAGTT GCTGGTCTGC TCCAGCGCCA TCACGGAAGA TCTGTACAAA CCGTTTTTGC GTAAAAACGC CAGCCAGAAA GAGCTGGTGT GGGTAGGCCG CGGGATGGTG CTGCTGGTAT CGTTAGTGGC TATCGCGCTC GCCGCCAATC CGGCCAACCG TGTACTCGGG CTGGTTAGCT ATGCCTGGGC CGGCTTTGGC GCCGCATTCG GGCCGGTGAT TCTGATTTCG CTGTTGTGGC CGCGCATGAC CCGTAACGGC GCGCTGTTCG GTATGCTGGT CGGCGCAGCG ACCGTCATCA TCTGGAAACA GTACGGTTGG CTGAACCTGT ATGAAATCAT CCCTGGTTTC CTGTTCGGCT CGGTCACGAT CGTGCTGGTT AGCCTGCTGG GACGCACGCC GTCTGCGGCT GTGACCGAGC GCTTCCATCA GGCTGAGCGG GAGTTTAAAT CCGCCCCGGC GGATGCCTGA
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Protein sequence | MTMMSTPMLV TFLVYIFGMV LIGLFAYRAT DNFSDYILGG RRMGSIVTAL SAGASDMSGW LLMGLPGAVF LSGISESWIA IGLTLGAYLN WKWVAGRLRV HTEVNHNALT LPDYFSHRFD DQSKLLRVIS ALVILVFFTI YCASGIVAGA RLFESTFGLS YNTALWAGAL ATIAYTFIGG YLAVSWTDTV QASLMIFALI LTPVIVILSV GGIAPSLSVI EAKNLSNLDM FRGLDLVAIL SLMGWGLGYF GQPHILARFM AADSHHTIHN ARRISMIWMV LCLAGAVTVG FFGIAYFTQN PEQAGNVSQN GERVFIELAR LLFNPWVAGI LLSAILAAVM STLSCQLLVC SSAITEDLYK PFLRKNASQK ELVWVGRGMV LLVSLVAIAL AANPANRVLG LVSYAWAGFG AAFGPVILIS LLWPRMTRNG ALFGMLVGAA TVIIWKQYGW LNLYEIIPGF LFGSVTIVLV SLLGRTPSAA VTERFHQAER EFKSAPADA
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