Gene Dd703_3720 details

Gene Information

• Locus tag: Dd703_3720
• Symbol: thiH
• ID: 8087090
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: +
• Start bp: 4310150
• End bp: 4311283
• Gene Length: 1134 bp
• Protein Length: 377 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 644837798
• Product: thiamine biosynthesis protein ThiH
• Protein accession: YP_002989297
• Protein GI: 242241116
• COG category: [H] Coenzyme transport and metabolism; [R] General function prediction only
• COG ID: [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes
• TIGRFAM ID: [TIGR02351] thiazole biosynthesis protein ThiH

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.526508
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATAACT CGTTTGCACA ACGCTGGCGA CAGCTGGACT GGGACGACCT GACGCTGCGC 
ATCAACGGTA AAACCCGCGC CGACGTCGAA CAGGCGCTGA ACGCCGAACA CCCCGACATG 
GAGGATTTCA TGGCGCTGCT GTCTCCGGCC GCCGCCTCTT ATCTGGAACC GCTGGCCCAA 
CGCGCCCAAC AGCTGACCCG GCAGCGCTTC GGCAATACCG TCGGCTTTTA CGTGCCGCTC 
TATCTCTCCA ATCTCTGCGC CAACGACTGC ACCTACTGCG GCTTCTCCAT GAGCAACCAC 
CTCAAGCGCA AAACCTTGAA CGACGAGGAA ATTCGGCGGG AATGCGGTGC CATCAAGGAA 
TTGGGGTTCG ACCACCTGCT GCTAGTGACG GGCGAGCACC AACGTAAGGT GGGGATGGAC 
TATTTCCGGC GCGTATTTCC ACTGATTCGC CCGCACTTCA GCGCGCTGAT GATGGAAGTG 
CAGCCGCTGG CGCAGGAAGA GTACGCGGAG CTGAAAACGC TGGGGCTGGA CGGGGTGATG 
GTGTATCAGG AAACCTACCA TCAGGCGACT TACGCCCGCC ACCACCTGCA CGGGAAAAAA 
CAGGATTTCG CCTGGCGGCT GAACACCCCG GATCGGCTGG GCCGCGCCGG GATCGACAAG 
ATCGGGCTGG GCGCGTTGAT CGGCCTGTCC GACAGTTGGC GCACCGACTG CTATATGGTG 
GCGGAACACT TGCGCCATCT GCAACGCCAC TATTGGCAAA GCCGCTACTC GTTGTCGTTT 
CCGCGCCTGC GCCCGTGCGC CGGCGGCATC GAACCCGCTT CGCTGATGGA TGAAGCGCAA 
CTGATGCAGA CGATCTGCGC CTTCCGGCTG CTGGCGCCCG ATGTAGAACT GTCGCTGTCG 
ACCCGGGAAT CGCCCCATTT TCGCGACCAC ATGATCCCGA TCGCCATCAA CAACGTCAGC 
GCTTTCTCCA AAACCCAGCC GGGCGGCTAC GCCGACGGCC ATGCGGAATT GGAGCAGTTC 
TCCCCGCACG ACGACCGCCG GCCGGAAGCA GTGGCCGATG TCTTGACGCG CGCCGGCCTG 
CAGCCGGTCT GGAAAGACTG GGAGGGATAT CTGGGCCGGA CGATCGCAAA CTGA 

 

Protein sequence

MDNSFAQRWR QLDWDDLTLR INGKTRADVE QALNAEHPDM EDFMALLSPA AASYLEPLAQ 
RAQQLTRQRF GNTVGFYVPL YLSNLCANDC TYCGFSMSNH LKRKTLNDEE IRRECGAIKE 
LGFDHLLLVT GEHQRKVGMD YFRRVFPLIR PHFSALMMEV QPLAQEEYAE LKTLGLDGVM 
VYQETYHQAT YARHHLHGKK QDFAWRLNTP DRLGRAGIDK IGLGALIGLS DSWRTDCYMV 
AEHLRHLQRH YWQSRYSLSF PRLRPCAGGI EPASLMDEAQ LMQTICAFRL LAPDVELSLS 
TRESPHFRDH MIPIAINNVS AFSKTQPGGY ADGHAELEQF SPHDDRRPEA VADVLTRAGL 
QPVWKDWEGY LGRTIAN