| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3707 |
|---|
| Symbol | purH |
|---|
| ID | 8087077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 4297914 |
|---|
| End bp | 4299503 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644837785 |
|---|
| Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| Protein accession | YP_002989284 |
|---|
| Protein GI | 242241103 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
|---|
| TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000279751 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAAC GTCGTCCTAT CCGTCGTGCT TTGCTCAGTG TTTCTGATAA AGCAGGTATT
GTTGAATTCG CCCAGGCGCT GTCGCAGCGC GGCGTCGAAC TGCTTTCCAC CGGCGGTACC
GCTCGTCTAC TGGCAGATGC CGGATTGCCA GTTACTGAGG TTTCAGATTA CACCGGGTTC
CCGGAAATGA TGGATGGACG AGTCAAGACA CTACATCCCA AAGTACACGG TGGTATTTTG
GGCCGCCGTG GAAAAGACGA CAACGTCATG GCACAGCACG ATATCAAACC GATCGATATG
GTAGTGGTGA ACCTATATCC ATTCGCCCAA ACCGTGGCTA AAGAGAATTG CACGCTGGAA
GATGCCGTGG AAAACATTGA TATCGGCGGC CCGACCATGG TTCGCTCTGC GGCCAAGAAC
CATAATGATG TCGCTATAGT CGTAAAAAGC GGCGACTATA CTGCCATCAT TGCGGAAATC
GATGCCAATG AAGGATCTCT GACTTACGAA ACCCGCTTCA ATCTGGCGAT TAAGGCATTT
GAGCATACCG CTGCTTACGA CAGCATGATC GCCAACTATT TTGGCAGTAA AGTTCCGCCT
TATCATGGTG ATACCACCCA GCCTTCCGGC CGTTTCCCGC GGACCTTAAA CCTGAACTTT
ATTAAAAAGC AGGATATGCG TTATGGCGAG AACAGCCACC AGCAGGCCGC GTTCTATATA
GAAGAAGCGC TCGCCGAAGC CTCGGTCGCC ACAGCCAGCC AGCACCAGGG CAAAGCATTG
TCATACAACA ACATTGCCGA TACCGACGCC GCATTGGAGT GTGTTAAAGA ATTCGCCGAG
CCCGCCTGCG TCATCGTCAA ACACGCCAAT CCTTGCGGCG TGGCTATCGG TTCATCGATT
TTGGATGCCT ACGAACGCGC TTACAAAACC GACCCAACCT CTGCGTTTGG CGGCATCATC
GCGTTCAACC GCGAACTCGA CGAAGACACA GCCAATGCCA TCATCAGCCG CCAGTTTGTC
GAGGTGATCA TCGCGCCGTC CGCCAGCGAA GCAGCACTGA AAGCGACATC AGCCAAACAG
AATGTACGTG TTTTGACTTG CGGCCAGTGG CAACAGCGTC TTTCCGGCTT GGATTTCAAA
CGCGTCAACG GCGGCTTGTT GGTTCAGGAA CGCGATCTGG GTATGGTGGA TGCCGCCCAA
CTGCGGGTAG TCACCGAGCG TCAACCGACA GCGGCAGAGC TGCGTGACGC GCTCTTCTGC
TGGAAAGTGG CGAAATTCGT TAAATCCAAC GCCATCGTTT ATGCTCGCGA CAACATGACC
ATCGGTATCG GCGCCGGCCA GATGAGCCGA GTCTATTCCG CCAAGATCGC CGGGATCAAG
GCTGGCGACG AAGGATTGGA AGTCAAAGGC TCCGTTATGG CATCCGATGC TTTCTTCCCA
TTCCGTGACG GCATCGACGC TGCGGCAGCA GTCGGCATCA CCTGTGTTAT TCAACCCGGC
GGCTCCATCC GCGATGATGA AGTCATCGCC GCCGCTAACG AACACGGCAT TGCCATGCTG
TTCACCGACA TGCGCCATTT CCGTCATTAA
|
|---|
| Protein sequence | MQQRRPIRRA LLSVSDKAGI VEFAQALSQR GVELLSTGGT ARLLADAGLP VTEVSDYTGF
PEMMDGRVKT LHPKVHGGIL GRRGKDDNVM AQHDIKPIDM VVVNLYPFAQ TVAKENCTLE
DAVENIDIGG PTMVRSAAKN HNDVAIVVKS GDYTAIIAEI DANEGSLTYE TRFNLAIKAF
EHTAAYDSMI ANYFGSKVPP YHGDTTQPSG RFPRTLNLNF IKKQDMRYGE NSHQQAAFYI
EEALAEASVA TASQHQGKAL SYNNIADTDA ALECVKEFAE PACVIVKHAN PCGVAIGSSI
LDAYERAYKT DPTSAFGGII AFNRELDEDT ANAIISRQFV EVIIAPSASE AALKATSAKQ
NVRVLTCGQW QQRLSGLDFK RVNGGLLVQE RDLGMVDAAQ LRVVTERQPT AAELRDALFC
WKVAKFVKSN AIVYARDNMT IGIGAGQMSR VYSAKIAGIK AGDEGLEVKG SVMASDAFFP
FRDGIDAAAA VGITCVIQPG GSIRDDEVIA AANEHGIAML FTDMRHFRH
|
|---|
| |