Gene Dd703_3655 details

Gene Information

• Locus tag: Dd703_3655
• ID: 8087021
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: +
• Start bp: 4240012
• End bp: 4240620
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 644837731
• Product: lipopolysaccharide transport periplasmic protein LptA
• Protein accession: YP_002989234
• Protein GI: 242241053
• COG category: [S] Function unknown
• COG ID: [COG1934] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR03002] lipopolysaccharide transport periplasmic protein LptA

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATCCA ACCTAAACAA TAATGTGTTG CACAGCATCC TGGTCGCCAG CGCCCTGTTC 
GCCGTCAGCC TTCCGGCATT GGCGCTGACC GGCGATACCG ATCAGCCCAT CCATATCGAT 
TCCGATCAGC AGGCGCTGGA TATGCAGAGC AACGTGGTCA CATTCACCGG CAACGTGATC 
GTGACCCAGG GTTCCATCAA GGTTCAGGCC GACAAAGTCG TGGTCACACG TCCGAACGGC 
CAGCAGGGCC ATGAAATCAT TGAAGGTTAC GGCAACCCGG CGACCTTTTA TCAGATGCAG 
GACAACGGTA AACCGGTAAA AGGACACGCG CAGAAAATGC GCTATGAACT GGACAAGCAG 
CTCGTCATTC TTACCGGCAA CGCTTATCTG GAACAGCTTG ACAGTAATGT CAAAGGCGAT 
CGCATTACCT ACCTGGTTCA ACAACAACAG ATGGAAGCCT TCAGCGACAA GGGTAAACGG 
GTAACTACCG TTCTGGTGCC GTCGCAATTG CAGGACAAGG GTACCCAGGC CAATCCGAAT 
GGCGTTAAGC CTGCCGCAAG TCAGAGCAAA CCCGGCGCCA GTCAGACCAA ACCCGCCAAA 
CAACAGTGA 

 

Protein sequence

MKSNLNNNVL HSILVASALF AVSLPALALT GDTDQPIHID SDQQALDMQS NVVTFTGNVI 
VTQGSIKVQA DKVVVTRPNG QQGHEIIEGY GNPATFYQMQ DNGKPVKGHA QKMRYELDKQ 
LVILTGNAYL EQLDSNVKGD RITYLVQQQQ MEAFSDKGKR VTTVLVPSQL QDKGTQANPN 
GVKPAASQSK PGASQTKPAK QQ