| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3642 |
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| Symbol | |
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| ID | 8088951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 4229175 |
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| End bp | 4230545 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644837718 |
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| Product | protease Do |
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| Protein accession | YP_002989221 |
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| Protein GI | 242241040 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.393796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG CATCGTTGTT GTATAGCGCG CTGGCACTCA GCATAGGTCT ATCCTTGTCC
TCGCTTCCTA CGGCTAACGC CGCGCTGCCT TCGGTTGTGT CGGGTCAACC GTTGCCCAGC
CTGGCACCAA TGCTGGAAAA AGTCCTTCCG GCCGTCGTGA GCGTCCATGT AGAAGGCACA
CAAATTCAGC GCCAACGCAT CCCCGAAGAA TTCAAATTTT TCTTCGGCCC AAATACCCCC
TCGGAAAAGC AGAGCAGCCG CCCATTTGAA GGACTGGGCT CCGGCGTCAT CATCAGTGCG
GAAAAAGCCT ATGTGCTGAC CAACAACCAC GTCATCAACA ACGCGGATAA AATTCGTGTT
CAGTTGAACG ACGGTCGGGA ATACGACGCA AAACTGATCG GCCGCGACGA ACAGACCGAT
ATCGCCCTTT TGCAATTGGT GGATGCTAAA AACCTCACTG AGATCAAAAT GGCTGACTCT
GATCAGTTGC GCGTAGGTGA CTTTGCTGTT GCCGTGGGCA ACCCATTCGG TCTGGGCCAG
ACCGCGACCT CGGGAATTAT TTCCGCGCTG GGCCGCAGCG GCCTGAATCT GGAAGGGTTG
GAAAACTTTA TTCAGACTGA TGCTTCCATC AACCGGGGCA ATTCCGGCGG AGCATTGGTT
AACCTGAAAG GCGAGCTGAT CGGCATCAAC ACCGCTATTC TCGCACCGGG CGGCGGCAAC
ATCGGCATCG GTTTCGCTAT CCCCAGCAAC ATGGCGCAAA ACCTGGCCCA GCAGTTGGTA
GAATTTGGCG AAGTCAAACG CGGTCTGTTG GGCATCAAGG GCAGCGAGAT GACGTCTGAA
ATCGCCAAAG CGTTTAAGGT TGAGGCGCAA CGCGGCGCAT TCGTCAGCGA GGTCATTCCG
AAATCTGCGG CCGCCAAGGC CGGTATCAAA GCAGGGGATG TGCTGATTTC GCTGGATGGC
AAGCCGATTA ACAGTTTTGC CGAACTCCGA GCGAAAATCG GCACTACTGC GCCAGGCAAG
ACAGTTCGTG TCGGCCTGTT ACGTGACGGT AAACAGCAAG AAGTCTCCGT CGTGCTGGAC
AACAGCGCCA ATGCAACCAC CAACGCCGAC AATCTTTCGC CTGCGCTGCA AGGCGCTTCA
CTCACCAACG GTCAGTTGAA AGACGGCAGC AAAGGCGTAC TGATTGAGAA TGTCGCCAAG
GACAGTGCGG CGGCCAAGGT CGGCTTACAG AAAGGCGATA TTATCGTGGG CGTCAATCGC
GAGCGTGTTG AAAGCATCTC GCAATTGCGC AAGATCCTTG ACAGCAAACC CTCCGTGCTG
GCGCTGAATA TCGTCCGCGG TGAAGAAAGT ATCTATCTGT TGTTACGTTG A
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| Protein sequence | MKKASLLYSA LALSIGLSLS SLPTANAALP SVVSGQPLPS LAPMLEKVLP AVVSVHVEGT
QIQRQRIPEE FKFFFGPNTP SEKQSSRPFE GLGSGVIISA EKAYVLTNNH VINNADKIRV
QLNDGREYDA KLIGRDEQTD IALLQLVDAK NLTEIKMADS DQLRVGDFAV AVGNPFGLGQ
TATSGIISAL GRSGLNLEGL ENFIQTDASI NRGNSGGALV NLKGELIGIN TAILAPGGGN
IGIGFAIPSN MAQNLAQQLV EFGEVKRGLL GIKGSEMTSE IAKAFKVEAQ RGAFVSEVIP
KSAAAKAGIK AGDVLISLDG KPINSFAELR AKIGTTAPGK TVRVGLLRDG KQQEVSVVLD
NSANATTNAD NLSPALQGAS LTNGQLKDGS KGVLIENVAK DSAAAKVGLQ KGDIIVGVNR
ERVESISQLR KILDSKPSVL ALNIVRGEES IYLLLR
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