| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3627 |
|---|
| Symbol | |
|---|
| ID | 8088936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 4210303 |
|---|
| End bp | 4210875 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644837704 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002989207 |
|---|
| Protein GI | 242241026 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGATAT TTTCTTGCAT TGCCGTGCTG TCCACCTGTC TGATGCTGCA AGGTTGCATT
GGGGCCGTCG CTATCGGTAG CGCAGTGGCA ACTAAATCAG CCACCGACCC GAGATCGGTG
GGTACCCAAG TCGATGACGG GACACTGGAA TTGAGGGTAT CCAATGCTCT GGTCAAGGAT
ACCCAGCTAC ACAAAGAAGC CAGAATTTCC GTGACGGCCT ATCAGGGCAA AGTGTTACTG
ACCGGTCAGG CACCCTCAAC AGAGCTGGCA ACGCGCGCCA AACAAATAGC CATGGGCGTA
GAAGGCGCTA ACGAGGTGTA CAACGAGATA CGCAAAGGCA CGCCAATCTC GTTAGGCACT
GCATCCATGG ATACCTGGAT CACCACCAAA ATTCGCTCGC AACTGCTGGC CAGCGATACG
GTCAAGTCGT CCAACGTCAA GGTGACTACT GAAAACGGCG AGGTGTTCCT GCTAGGGCTG
CTAACCCGTA AGGAAGCGAC GTCCGCGGCT GAAATCGCCA GCAAAGTCAG TGGTGTCAAA
CATGTGACCA CCGCCTTCAG CTATCTGGAC TAA
|
|---|
| Protein sequence | MRIFSCIAVL STCLMLQGCI GAVAIGSAVA TKSATDPRSV GTQVDDGTLE LRVSNALVKD
TQLHKEARIS VTAYQGKVLL TGQAPSTELA TRAKQIAMGV EGANEVYNEI RKGTPISLGT
ASMDTWITTK IRSQLLASDT VKSSNVKVTT ENGEVFLLGL LTRKEATSAA EIASKVSGVK
HVTTAFSYLD
|
|---|
| |