Gene Dd703_3597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3597 
Symbol 
ID8088905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4177415 
End bp4177834 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content56% 
IMG OID644837674 
ProductTonB system transport protein ExbD 
Protein accessionYP_002989177 
Protein GI242240996 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID[TIGR02803] TonB system transport protein ExbD, group 1 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATGC ATCTCAATGA CGGGCAGAGC GAAAACGGCG AAATGCACGA TATTAACGTG 
ACGCCGTTTA TCGACGTCAT GCTGGTGTTG CTGATCATCT TTATGGTGGC CGCGCCGCTG
GCGACGGTAG ATGTCCGCGT CAATCTGCCT GCCTCCACCG CTAAACCCCA GCCGCGGCCG
GACAAGCCGG TATATCTGAC AGTGAAAGCG GATCGGCAGC TGTATCTGGG CGAGGAGCCG
GTGGCGGAAA CCGCATTGGC GCAGGCATTG GAAGCCAAAA CTCAGGGGAA CAAGGAAACC
ACGATTTTCT TTCAAGCTGA TAAGAGCGTC GATTACGAAA CCCTAATGAG GGTGATGGAT
TCACTGCGTG ATGCGGGGTA TCTCAAAGTC GGCCTGATGG GGGCGGAAAA AGCGCGGTAA
 
Protein sequence
MAMHLNDGQS ENGEMHDINV TPFIDVMLVL LIIFMVAAPL ATVDVRVNLP ASTAKPQPRP 
DKPVYLTVKA DRQLYLGEEP VAETALAQAL EAKTQGNKET TIFFQADKSV DYETLMRVMD
SLRDAGYLKV GLMGAEKAR