Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_3585 |
Symbol | |
ID | 8088893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 4161122 |
End bp | 4162045 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644837662 |
Product | CRISPR-associated protein Cas1 |
Protein accession | YP_002989165 |
Protein GI | 242240984 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1 [TIGR03638] CRISPR-associated endonuclease Cas1, ECOLI subtype |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTTTG TTCCGCTTAG CCCGATCCCG TTAAAAGACC GCACGTCGAT GATTTTTCTG CAATACGGGC AGATTGACGT GGTGGACGGC GCTTTTGTGT TGATCGACAA AACCGGTGTG CGTACCCATA TTCCGGTCGG TTCGGTGGCT TGCATCATGC TGGAGCCGGG CACGCGCGTC TCCCATGCGG CGGCCAAGCT GGCGGCTACC GTCGGCACGC TGTTGGTGTG GGTGGGCGAG GCCGGGGTGA GGTTATATGC CGCCGGACAA CCGGGCGGCG CGCGTTCCGA CCGGTTGTTG TATCAGGCGA AGCTGGCGTT GGATGAAGAA CTGCGGCTGA AAGTGGTGCG ACGCATGTTC GAACTGCGTT TTGGCGAACC GGCGCCGAGC CGCCGCTCCG TGGAGCAACT GCGCGGCATT GAAGGCGCGA GGGTACGCCA AACTTACAGC CTGCTGGCGA AGCAGTTCGG CGTGAAATGG GATGGCCGTC GCTACGATCC GAAAGACTGG GCGCGCGGCG ACAAGGCTAA CCAGTGCATC AGCGCCGCCA CCGCCTGCCT CTACGGTATT ACCGAAGCGG CGATACTGGC GGCAGGTTAC GCGCCCGCCA TCGGTTTTAT CCACAGCGGT AAGCCGTTAT CGTTTGTTTA CGATATTGCC GACATCATCA AGTTTGACGG TGTGGTGCCT AAAGCGTTCG AGATTGCGGC TCGGAACCCG CCGGAGCCGG ATCGCGAGGT GCGGGTCGCC TGTCGCGATA TTTTCCGTAG CCAGCAAACG TTGGCCAAAC TGATCCCCTT GATTGAGGAC GTGCTGGCCG CCGGTGAGAT AGAGCCGCCG CAGGCGCCGC CGGACGCGCA ACCACCGGCC ATTCCCGAAC CGACGCCGTT TGGCGATGCC GGACACCGGG GGCATGGCGC ATGA
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Protein sequence | MSFVPLSPIP LKDRTSMIFL QYGQIDVVDG AFVLIDKTGV RTHIPVGSVA CIMLEPGTRV SHAAAKLAAT VGTLLVWVGE AGVRLYAAGQ PGGARSDRLL YQAKLALDEE LRLKVVRRMF ELRFGEPAPS RRSVEQLRGI EGARVRQTYS LLAKQFGVKW DGRRYDPKDW ARGDKANQCI SAATACLYGI TEAAILAAGY APAIGFIHSG KPLSFVYDIA DIIKFDGVVP KAFEIAARNP PEPDREVRVA CRDIFRSQQT LAKLIPLIED VLAAGEIEPP QAPPDAQPPA IPEPTPFGDA GHRGHGA
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