Gene Dd703_3585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3585 
Symbol 
ID8088893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4161122 
End bp4162045 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content62% 
IMG OID644837662 
ProductCRISPR-associated protein Cas1 
Protein accessionYP_002989165 
Protein GI242240984 
COG category[L] Replication, recombination and repair 
COG ID[COG1518] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03638] CRISPR-associated endonuclease Cas1, ECOLI subtype 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTTTG TTCCGCTTAG CCCGATCCCG TTAAAAGACC GCACGTCGAT GATTTTTCTG 
CAATACGGGC AGATTGACGT GGTGGACGGC GCTTTTGTGT TGATCGACAA AACCGGTGTG
CGTACCCATA TTCCGGTCGG TTCGGTGGCT TGCATCATGC TGGAGCCGGG CACGCGCGTC
TCCCATGCGG CGGCCAAGCT GGCGGCTACC GTCGGCACGC TGTTGGTGTG GGTGGGCGAG
GCCGGGGTGA GGTTATATGC CGCCGGACAA CCGGGCGGCG CGCGTTCCGA CCGGTTGTTG
TATCAGGCGA AGCTGGCGTT GGATGAAGAA CTGCGGCTGA AAGTGGTGCG ACGCATGTTC
GAACTGCGTT TTGGCGAACC GGCGCCGAGC CGCCGCTCCG TGGAGCAACT GCGCGGCATT
GAAGGCGCGA GGGTACGCCA AACTTACAGC CTGCTGGCGA AGCAGTTCGG CGTGAAATGG
GATGGCCGTC GCTACGATCC GAAAGACTGG GCGCGCGGCG ACAAGGCTAA CCAGTGCATC
AGCGCCGCCA CCGCCTGCCT CTACGGTATT ACCGAAGCGG CGATACTGGC GGCAGGTTAC
GCGCCCGCCA TCGGTTTTAT CCACAGCGGT AAGCCGTTAT CGTTTGTTTA CGATATTGCC
GACATCATCA AGTTTGACGG TGTGGTGCCT AAAGCGTTCG AGATTGCGGC TCGGAACCCG
CCGGAGCCGG ATCGCGAGGT GCGGGTCGCC TGTCGCGATA TTTTCCGTAG CCAGCAAACG
TTGGCCAAAC TGATCCCCTT GATTGAGGAC GTGCTGGCCG CCGGTGAGAT AGAGCCGCCG
CAGGCGCCGC CGGACGCGCA ACCACCGGCC ATTCCCGAAC CGACGCCGTT TGGCGATGCC
GGACACCGGG GGCATGGCGC ATGA
 
Protein sequence
MSFVPLSPIP LKDRTSMIFL QYGQIDVVDG AFVLIDKTGV RTHIPVGSVA CIMLEPGTRV 
SHAAAKLAAT VGTLLVWVGE AGVRLYAAGQ PGGARSDRLL YQAKLALDEE LRLKVVRRMF
ELRFGEPAPS RRSVEQLRGI EGARVRQTYS LLAKQFGVKW DGRRYDPKDW ARGDKANQCI
SAATACLYGI TEAAILAAGY APAIGFIHSG KPLSFVYDIA DIIKFDGVVP KAFEIAARNP
PEPDREVRVA CRDIFRSQQT LAKLIPLIED VLAAGEIEPP QAPPDAQPPA IPEPTPFGDA
GHRGHGA