Gene Dd703_3548 details

Gene Information

• Locus tag: Dd703_3548
• ID: 8089503
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: -
• Start bp: 4117865
• End bp: 4119910
• Gene Length: 2046 bp
• Protein Length: 681 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 644837624
• Product: P4 alpha zinc-binding domain protein
• Protein accession: YP_002989128
• Protein GI: 242240947
• COG category: [S] Function unknown
• COG ID: [COG4643] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.88149
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAAGT TTGTCTCGGA AAGTGTTGCA CAATCCCGCC ACCGCTGGCC GTCGATTCTG 
GCGGCATTAG ATATCTACTT TCCTGCCGGG GGCCAGCATG GCCCTTGCCC TGTCTGCGGT 
GGAAAAGATC GCTTCCGCTT TGATGACAAA CGGGGGCGTG GCACCTGGTT CTGCAATCAT 
TGCGGCCACG GTGATGGTCT GGATCTGGTC GCCCGCGTCA GGCGGTGTGA TATCGCGGAA 
GCGGCCAGAG TGGTGACGGC ACTGGCGTCA TCAGCCAGTG AAACACCGCC CGCCAGAGAA 
AAGGCGGTTG ATCCCCGCCC GCTGGCAGAG CGCATCAAGG CGCTGATGAC AGCCACGAGC 
ACCGGGGAAA GCCCGTATCT GAAAGCCAGA GAGCTGATGA CACCGGCTAT GCTGCTGACG 
GCCGCACAGG CGATGATCAT CGGGCGTGTC CGGTTTGGCG AAGGATCGCT ACTGTTGCCA 
ATGTTCCGCA CCTCCGGTGA ACTGGCAGGG GCGCAACTGA TCACGCCCGG CGGTGAAAAG 
CGGTTGTACC CCGGCACGCA GTTGAAAGGG GCGTTTATTC CGGTCAACCA CGGCCCGGAG 
CCGTCGAAGC TGATTATCAC CGAAGGGTAT GCCACAGCGC TCACCCTGCA ACAATGCTCG 
TCATGCCATG TGGTGGCGGC GGTATCGGCT AATAACCTGC TGAACGTCGC GCAGGCATTC 
AGGGCGCGTT ATCCCCATTG CTGCCTGATT CTGGCCGGGG ATAACGATAT TCACCCGGAT 
GGCGCGGCCA ACACCGGCAA ACTGATGGCG GAGAAAGCGG CGCAGGCCGT TGACGGCTGG 
GTATCCCTGC CGCCGACCGA TACCGCCTGT GACTGGGATG ATTTTCGCCA GCGGCACGGC 
ATGGAAGCTA CCAAAGCCGC GTTTCGGCGT CAGCTTACCC GGCCTGCCGT TATCAGCCCG 
GCCCCATTGC CTGACGCCGG GCTGTCTCCT GTAACGGCAT TTTCCTCCGC CCTGCCACTG 
CGTAAAGGCT CGGAAGGGTT TGATACCCGA CAGGATTACC TGATCAAGGG CTACCTGCCG 
AGCGGTGCGG TTGCCAGTGC TTACGGTGCC AGCGGGTCGT ATAAATCCTT TCTGGCTGTT 
TCCTGGGCGT GCCATATCGC CACCGGAAAG CCGTGGGCCA ACCGACCGGT CACGCAGGGC 
GCAGTGATTT ATGTGGTGGG TGAAGGTGGG ATCGGCGTAC CACGCCGGAT TCGGGCGTGG 
GAGGAAACGC TGAACGACCG TAGCCCGATT GATGCGCTCT ACCGCGTTGA CTGCCCGGTA 
TTCCCGGCCA GTCCCGACAG CGTGGAGCAG GTGATCAAGG CCGCCCATGA CGTGCAGGCC 
GCCACCGGGA TGGCGGTACG GCTGATCATT CTGGATACAC TGGCCCGCTG CTTTGGCGGT 
TCGGATGAAA ACGCCGCTAA AGACATGGGG GCGTTTATTC AGGGTTGTGA CTACATCAAG 
GCGGCCACGC AGGCCACGGT ACTGATTATT CATCACTCCG GCAAAGATCA GGACAAAGGC 
GCCCGCGGCT CCAGCGCCTT CCGGGCTGCG CTGGACGTGG AGTTTAATGT GCGCCGCGAG 
GCCGACGGGC AGGCGCTGAT CCTGACCTGC ACCAAAATGA AGGACGCCGA AGAGCCGCCT 
CGCCGGGCCT ACGACCTGAC GGCGGTGAAT CTGTACGTGG ACGATGACGG CGAGCCGGTC 
ACGTCGCTGG TTCTGCGGGA TGAAGGCCGG GAAGTCCGCG ATGACCCGAC CGGCGCTGAC 
CCGGCGCTCA GTGGGATCAC CCGGCTGACG GATAACCATG TGGCGCTGTG GGAAGCGATC 
CGCTCGCGTA CGGCAAGTGG TGACGGCTGC ACCCGCGCAC TGGTGCGCGA CGATATGCGG 
GCGATGGGGT TTGATGTCTC CAAAAAGTTT ACCCGCTGGC TGGATAAACT CGTCAGGGAT 
GACCTGATCG CGCTGGATGG TGAAAACATC GTGCCATTAT CAAAACGCGG TAACGTGGGG 
GAATAA 

 

Protein sequence

MSKFVSESVA QSRHRWPSIL AALDIYFPAG GQHGPCPVCG GKDRFRFDDK RGRGTWFCNH 
CGHGDGLDLV ARVRRCDIAE AARVVTALAS SASETPPARE KAVDPRPLAE RIKALMTATS 
TGESPYLKAR ELMTPAMLLT AAQAMIIGRV RFGEGSLLLP MFRTSGELAG AQLITPGGEK 
RLYPGTQLKG AFIPVNHGPE PSKLIITEGY ATALTLQQCS SCHVVAAVSA NNLLNVAQAF 
RARYPHCCLI LAGDNDIHPD GAANTGKLMA EKAAQAVDGW VSLPPTDTAC DWDDFRQRHG 
MEATKAAFRR QLTRPAVISP APLPDAGLSP VTAFSSALPL RKGSEGFDTR QDYLIKGYLP 
SGAVASAYGA SGSYKSFLAV SWACHIATGK PWANRPVTQG AVIYVVGEGG IGVPRRIRAW 
EETLNDRSPI DALYRVDCPV FPASPDSVEQ VIKAAHDVQA ATGMAVRLII LDTLARCFGG 
SDENAAKDMG AFIQGCDYIK AATQATVLII HHSGKDQDKG ARGSSAFRAA LDVEFNVRRE 
ADGQALILTC TKMKDAEEPP RRAYDLTAVN LYVDDDGEPV TSLVLRDEGR EVRDDPTGAD 
PALSGITRLT DNHVALWEAI RSRTASGDGC TRALVRDDMR AMGFDVSKKF TRWLDKLVRD 
DLIALDGENI VPLSKRGNVG E