Gene Dd703_3541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3541 
Symbol 
ID8089496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4112815 
End bp4114071 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content54% 
IMG OID644837617 
Productintegrase family protein 
Protein accessionYP_002989121 
Protein GI242240940 
COG category[L] Replication, recombination and repair 
COG ID[COG0582] Integrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCTGA CTGACGTTGT TGCTCGTACC GCTAAGCCCC GCGAGAAAGC CTACAAGCTT 
GCGGATGCAC ATGGCCTGTA CCTTCTGGTG AGTCCTAACG GTTCTAAGCG TTGGTATCTC
AAATACCGCT TTGAAGGTAA GGAAAGCCGG ATTGCTTTCG GTGCCTACCC GCTGATCTCG
CTGGCGAAGG CCAGAGAGAA ACGCGACGAG GTGCGATTAC TGCTGTCAGA AGGCATCCAC
CCAACGGAAA AGCGGGAAGA AGAGAAAGAA CAGGCACAGG ATGCGCTGAA CACCTTTGAA
AAGGTGGCAA GAGACTGGCA CCGAAACATC AGCCAAAACC GATGGTCACA AACGCACGCC
GGACGGGTAT GGCGTGACAT GGAGCGTAAT ATTCTGCCTG CCATCGGCCA GCGCCACATC
GCCGACCTGA AAACCAAAGA CCTGCTTGAA CCGCTTAAAG CCGTGGAGCA AAACGGCCAT
CTTGACTTGG CGTCGCGGCT ACGCCAGCGC GTTACCGACA TCATGCGTTA CGCGGTACAA
AATGACCTGA TCGAGCGCAA CCCGGCGCAA GATCTCACCG GGGCGATAGC TGCGCCAAAG
GCGACGCATC GGCCAGCCTT GAAGCTCGAT AAACTGCCTG ACTTTCTGGC ACGGATTGAA
TGCTACAAAG GGAGAGCGTT AACCCGACTG GCCTTAAAAC TTACCCTGTG CGTTTTCATC
CGTTCCAGCG AGCTACGCTT TGCCCGTTGG CCGGAAATCG ACTTTAAACG CGCGATGTGG
ACGATACCGC CCGAACGTGA AGCTATCCCC GGAGTGAAAC ACTCACAGCG TGGCGCAAAG
ATGCGCTCTG AACATTTGGT GCCGTTATCC CGACAGGCTT TAGCACTGCT GGAAGAGATT
AAGGCTATCA GCGGCGCTCA CGAACTGGTC TTCCCCGGCG ACCACCGACC AATCAAACCG
ATGAGTGAAA ACACCATCAA CAGTGCATTG CGAACAATGG GCTATGACAC TACCACCGAA
GTATGCGGAC ACGGCTTCCG TACTATGGCC TGTAGCGCGT TAGTTGAGTC TGGTCAGTGG
TCGCGGGATG CCGTAGCGCG GCAAATGAGC CATCAGGAGC ACAATGGTGT CCGTGCTGCA
TATATCCACA AAGCCGAACA TCTTGAGGAG CGCAAGCTGA TGCTGCAATG GTGGGCTGAT
TATCTGGATG CCAACCGGGA AGAGTATGTG GTGCCGTATG AGTTTAAAAA TATTTGA
 
Protein sequence
MALTDVVART AKPREKAYKL ADAHGLYLLV SPNGSKRWYL KYRFEGKESR IAFGAYPLIS 
LAKAREKRDE VRLLLSEGIH PTEKREEEKE QAQDALNTFE KVARDWHRNI SQNRWSQTHA
GRVWRDMERN ILPAIGQRHI ADLKTKDLLE PLKAVEQNGH LDLASRLRQR VTDIMRYAVQ
NDLIERNPAQ DLTGAIAAPK ATHRPALKLD KLPDFLARIE CYKGRALTRL ALKLTLCVFI
RSSELRFARW PEIDFKRAMW TIPPEREAIP GVKHSQRGAK MRSEHLVPLS RQALALLEEI
KAISGAHELV FPGDHRPIKP MSENTINSAL RTMGYDTTTE VCGHGFRTMA CSALVESGQW
SRDAVARQMS HQEHNGVRAA YIHKAEHLEE RKLMLQWWAD YLDANREEYV VPYEFKNI