Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_3445 |
Symbol | |
ID | 8089399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 4013233 |
End bp | 4015623 |
Gene Length | 2391 bp |
Protein Length | 796 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644837523 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_002989027 |
Protein GI | 242240846 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00827087 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACATG AACATCCCCG CTACACCTTA TTCAAGCACG ACTCCGCGCA CCGTGCCGGA AAAGGTGCGC TGCAGCCGAT ATCGCGCGTA TCCGGCACGC ATCCGGATCG CCATGAACAT GAACATCATC GGCTCGACAC CGGGCACGGG TTGCCCGGTA CGGACGGCTG CCACTGCCAC GGCACCGACC CTGCGCATGG CGATCAGTCT TGCTGTGCCG CGCCCACTGA CCCCTTGTCG CCGTTAAACG GCGGCGAGCG CCAGGGCGAT CAGCAGCGCA CGCCGATACG GATTATGCAG ATGGACTGCC CGACGGAAGA GGCGATGATC CGCAAGAAAC TCGCCACCCT GAACGCCGTG CAATCGCTGG AGTTCAATCT GATGCAGCGC GTACTGACCG TCACCCACCG GCACGATGCG CTGGACAGTA TTCTGGCCGC GATTCGCTCG CTGGGTTTTG AGCCGGAAAT CAACCTCGTC GGCCGTGCGG CAGAACACGC TCAGCCGAAA AAGGCCTGGT GGCCGCTGGG TCTCGCCATC GCAGCCGCAG GCATGGCCGA AGTCGCAGAG TGGATGGGGT GGCCGTGGTG GACAGCGGCC CTATTGGCCA TTATCGCCGT CGCCGCCAGT GGGCTGACCA CCTACCGCAA AGGCTGGATG GCGATACGCA ACGGCAACCT GAACATCAAT GCGTTGATGA GTGTAGCAGT CACCGGCGCA TTGTTGCTGC AACAATGGCC GGAGGCCGCC ATGGTGATGG TGTTGTTCAC TATCGCCGAA CTGATTGAAG CCCGCTCGCT GGATCGGGCC AGAAACGCCA TCGCCGGCCT GATGGCGCTG ACGCCGGAAA CCGCTACAGT GCAACTGCCG AACGGCGACT GGCAGGATGT GGACGCGAAA ACCCTCCAGC CGGGCCGTAT CGTGCGCGTC AAACCCGGCG AGCGTATCGC GCTGGACGGC GAGATTGTAC GCGGCAGTTC GGCGGTGAAT CAGGCGCCGA TCACCGGCGA AAGCCTGCCG GTGGACAAAA CCGTCGGCGA TAGCGTGTTT GCCGGCACCA TCAACGAAAG CGGCTCGTTT GAATACCGGG TGACGGCCGC CGCCGCCAAT ACCACGCTGG CGCGTATTAT CCATGCCGTT GAAGAGGCGC AGGGCGCCAA AGCGCCGACG CAACGCTTCG TCGACCGCTT CGCCAAAATT TATACCCCGG CGGTATTTCT GGTGGCGCTG TTGGTCGCGC TCATTCCGCC GTTGTTCATC GGCGGCTGGC TGGATTGGGC ATACCGTGCG CTGGTGCTGT TGGTGATCGC CTGCCCCTGC GCGCTGGTGA TCTCTACGCC GGTGACTATC GTCAGCGGGC TGGCTGCCGC CGCACGCCGC GGCATCCTGA TCAAGGGCGG CGCGTTTCTG GAAAAAGGAC ATGCGCTGTC CTGGCTGGCG CTGGACAAAA CCGGCACGCT GACGCTCGGT AAACCGACGC AGACCGGCTT TATCAACTGC GGCGAGCTGG ATGAACGCCG CAGCCAAGCA CTGGCCGCCA GTCTGGCCGA CCGCTCCGAC CATCCGGTGT CGCAGGCGAT CGCCAGCGCG GCGCAACAGG CGCAGATTGC GCCGATCGCG GTCGATACGT TTACCGCGCT GGGCGGCCTT GGCGTCACCG GCGTCATCGA CGGACACGCC TATTTTCTGG GCAGCCCGCG GCTGGCACAG CAACGGTTGG GCGATGCTGC GACCCGACAC GCCGATCGGA TGGCGGGCCT GGAACAGGAT GGCAATACGG TGGTGGTGCT TGGCGACGAA CGCCAGGTGC TGGCGCTGAT AGCCGTGGCA GATACCGTCA AACCGGGCAG CCGCGACGCC GTCGCCAGCC TGCACCGCGC CGGGATTAAG ACCCTGATGC TGACCGGCGA TAATCCGCAC GTCGCCCAGG CGGTCGCCAG AGAGGTGGGC ATCGACGAAG CGCGCGGCAA CCTGCTGCCG ACGGATAAGC TGTCCATCAT CGAACAGTTG GCCGGTAAAG GCGTGATCGG TATGGTGGGC GACGGCATCA ACGATACCCC GGCGCTGGCG CGGGCGGATA TCGGGTTCGC CATGGGCGCG ATGGGAACCG ATAGCGCCAT CGAAACCGCC GATGTGGCGC TGATGAACGA CGACTTGCGC AAGATCCCCG AATTCGTAAG GATTTCAACA TCAACCCGCC GCATCCTGAT CCAGAACATC GTGCTGGCGT TGGGCATCAA GGCGGTATTC CTGCTGTTGA CGCTGATGGG GCTTGGCACC ATGTGGATGG CAGTATTCGC CGATGTCGGC GCCAGCCTGC TGGTGGTCGG CAACGGACTG CGACTGCTGC GCCAGTCTAC CCCCCGCGAG CAGTCCGCAC CAGCGGCCTG A
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Protein sequence | MSHEHPRYTL FKHDSAHRAG KGALQPISRV SGTHPDRHEH EHHRLDTGHG LPGTDGCHCH GTDPAHGDQS CCAAPTDPLS PLNGGERQGD QQRTPIRIMQ MDCPTEEAMI RKKLATLNAV QSLEFNLMQR VLTVTHRHDA LDSILAAIRS LGFEPEINLV GRAAEHAQPK KAWWPLGLAI AAAGMAEVAE WMGWPWWTAA LLAIIAVAAS GLTTYRKGWM AIRNGNLNIN ALMSVAVTGA LLLQQWPEAA MVMVLFTIAE LIEARSLDRA RNAIAGLMAL TPETATVQLP NGDWQDVDAK TLQPGRIVRV KPGERIALDG EIVRGSSAVN QAPITGESLP VDKTVGDSVF AGTINESGSF EYRVTAAAAN TTLARIIHAV EEAQGAKAPT QRFVDRFAKI YTPAVFLVAL LVALIPPLFI GGWLDWAYRA LVLLVIACPC ALVISTPVTI VSGLAAAARR GILIKGGAFL EKGHALSWLA LDKTGTLTLG KPTQTGFINC GELDERRSQA LAASLADRSD HPVSQAIASA AQQAQIAPIA VDTFTALGGL GVTGVIDGHA YFLGSPRLAQ QRLGDAATRH ADRMAGLEQD GNTVVVLGDE RQVLALIAVA DTVKPGSRDA VASLHRAGIK TLMLTGDNPH VAQAVAREVG IDEARGNLLP TDKLSIIEQL AGKGVIGMVG DGINDTPALA RADIGFAMGA MGTDSAIETA DVALMNDDLR KIPEFVRIST STRRILIQNI VLALGIKAVF LLLTLMGLGT MWMAVFADVG ASLLVVGNGL RLLRQSTPRE QSAPAA
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