Gene Dd703_3445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3445 
Symbol 
ID8089399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4013233 
End bp4015623 
Gene Length2391 bp 
Protein Length796 aa 
Translation table11 
GC content64% 
IMG OID644837523 
Productheavy metal translocating P-type ATPase 
Protein accessionYP_002989027 
Protein GI242240846 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00827087 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACATG AACATCCCCG CTACACCTTA TTCAAGCACG ACTCCGCGCA CCGTGCCGGA 
AAAGGTGCGC TGCAGCCGAT ATCGCGCGTA TCCGGCACGC ATCCGGATCG CCATGAACAT
GAACATCATC GGCTCGACAC CGGGCACGGG TTGCCCGGTA CGGACGGCTG CCACTGCCAC
GGCACCGACC CTGCGCATGG CGATCAGTCT TGCTGTGCCG CGCCCACTGA CCCCTTGTCG
CCGTTAAACG GCGGCGAGCG CCAGGGCGAT CAGCAGCGCA CGCCGATACG GATTATGCAG
ATGGACTGCC CGACGGAAGA GGCGATGATC CGCAAGAAAC TCGCCACCCT GAACGCCGTG
CAATCGCTGG AGTTCAATCT GATGCAGCGC GTACTGACCG TCACCCACCG GCACGATGCG
CTGGACAGTA TTCTGGCCGC GATTCGCTCG CTGGGTTTTG AGCCGGAAAT CAACCTCGTC
GGCCGTGCGG CAGAACACGC TCAGCCGAAA AAGGCCTGGT GGCCGCTGGG TCTCGCCATC
GCAGCCGCAG GCATGGCCGA AGTCGCAGAG TGGATGGGGT GGCCGTGGTG GACAGCGGCC
CTATTGGCCA TTATCGCCGT CGCCGCCAGT GGGCTGACCA CCTACCGCAA AGGCTGGATG
GCGATACGCA ACGGCAACCT GAACATCAAT GCGTTGATGA GTGTAGCAGT CACCGGCGCA
TTGTTGCTGC AACAATGGCC GGAGGCCGCC ATGGTGATGG TGTTGTTCAC TATCGCCGAA
CTGATTGAAG CCCGCTCGCT GGATCGGGCC AGAAACGCCA TCGCCGGCCT GATGGCGCTG
ACGCCGGAAA CCGCTACAGT GCAACTGCCG AACGGCGACT GGCAGGATGT GGACGCGAAA
ACCCTCCAGC CGGGCCGTAT CGTGCGCGTC AAACCCGGCG AGCGTATCGC GCTGGACGGC
GAGATTGTAC GCGGCAGTTC GGCGGTGAAT CAGGCGCCGA TCACCGGCGA AAGCCTGCCG
GTGGACAAAA CCGTCGGCGA TAGCGTGTTT GCCGGCACCA TCAACGAAAG CGGCTCGTTT
GAATACCGGG TGACGGCCGC CGCCGCCAAT ACCACGCTGG CGCGTATTAT CCATGCCGTT
GAAGAGGCGC AGGGCGCCAA AGCGCCGACG CAACGCTTCG TCGACCGCTT CGCCAAAATT
TATACCCCGG CGGTATTTCT GGTGGCGCTG TTGGTCGCGC TCATTCCGCC GTTGTTCATC
GGCGGCTGGC TGGATTGGGC ATACCGTGCG CTGGTGCTGT TGGTGATCGC CTGCCCCTGC
GCGCTGGTGA TCTCTACGCC GGTGACTATC GTCAGCGGGC TGGCTGCCGC CGCACGCCGC
GGCATCCTGA TCAAGGGCGG CGCGTTTCTG GAAAAAGGAC ATGCGCTGTC CTGGCTGGCG
CTGGACAAAA CCGGCACGCT GACGCTCGGT AAACCGACGC AGACCGGCTT TATCAACTGC
GGCGAGCTGG ATGAACGCCG CAGCCAAGCA CTGGCCGCCA GTCTGGCCGA CCGCTCCGAC
CATCCGGTGT CGCAGGCGAT CGCCAGCGCG GCGCAACAGG CGCAGATTGC GCCGATCGCG
GTCGATACGT TTACCGCGCT GGGCGGCCTT GGCGTCACCG GCGTCATCGA CGGACACGCC
TATTTTCTGG GCAGCCCGCG GCTGGCACAG CAACGGTTGG GCGATGCTGC GACCCGACAC
GCCGATCGGA TGGCGGGCCT GGAACAGGAT GGCAATACGG TGGTGGTGCT TGGCGACGAA
CGCCAGGTGC TGGCGCTGAT AGCCGTGGCA GATACCGTCA AACCGGGCAG CCGCGACGCC
GTCGCCAGCC TGCACCGCGC CGGGATTAAG ACCCTGATGC TGACCGGCGA TAATCCGCAC
GTCGCCCAGG CGGTCGCCAG AGAGGTGGGC ATCGACGAAG CGCGCGGCAA CCTGCTGCCG
ACGGATAAGC TGTCCATCAT CGAACAGTTG GCCGGTAAAG GCGTGATCGG TATGGTGGGC
GACGGCATCA ACGATACCCC GGCGCTGGCG CGGGCGGATA TCGGGTTCGC CATGGGCGCG
ATGGGAACCG ATAGCGCCAT CGAAACCGCC GATGTGGCGC TGATGAACGA CGACTTGCGC
AAGATCCCCG AATTCGTAAG GATTTCAACA TCAACCCGCC GCATCCTGAT CCAGAACATC
GTGCTGGCGT TGGGCATCAA GGCGGTATTC CTGCTGTTGA CGCTGATGGG GCTTGGCACC
ATGTGGATGG CAGTATTCGC CGATGTCGGC GCCAGCCTGC TGGTGGTCGG CAACGGACTG
CGACTGCTGC GCCAGTCTAC CCCCCGCGAG CAGTCCGCAC CAGCGGCCTG A
 
Protein sequence
MSHEHPRYTL FKHDSAHRAG KGALQPISRV SGTHPDRHEH EHHRLDTGHG LPGTDGCHCH 
GTDPAHGDQS CCAAPTDPLS PLNGGERQGD QQRTPIRIMQ MDCPTEEAMI RKKLATLNAV
QSLEFNLMQR VLTVTHRHDA LDSILAAIRS LGFEPEINLV GRAAEHAQPK KAWWPLGLAI
AAAGMAEVAE WMGWPWWTAA LLAIIAVAAS GLTTYRKGWM AIRNGNLNIN ALMSVAVTGA
LLLQQWPEAA MVMVLFTIAE LIEARSLDRA RNAIAGLMAL TPETATVQLP NGDWQDVDAK
TLQPGRIVRV KPGERIALDG EIVRGSSAVN QAPITGESLP VDKTVGDSVF AGTINESGSF
EYRVTAAAAN TTLARIIHAV EEAQGAKAPT QRFVDRFAKI YTPAVFLVAL LVALIPPLFI
GGWLDWAYRA LVLLVIACPC ALVISTPVTI VSGLAAAARR GILIKGGAFL EKGHALSWLA
LDKTGTLTLG KPTQTGFINC GELDERRSQA LAASLADRSD HPVSQAIASA AQQAQIAPIA
VDTFTALGGL GVTGVIDGHA YFLGSPRLAQ QRLGDAATRH ADRMAGLEQD GNTVVVLGDE
RQVLALIAVA DTVKPGSRDA VASLHRAGIK TLMLTGDNPH VAQAVAREVG IDEARGNLLP
TDKLSIIEQL AGKGVIGMVG DGINDTPALA RADIGFAMGA MGTDSAIETA DVALMNDDLR
KIPEFVRIST STRRILIQNI VLALGIKAVF LLLTLMGLGT MWMAVFADVG ASLLVVGNGL
RLLRQSTPRE QSAPAA