| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3377 |
|---|
| Symbol | |
|---|
| ID | 8089330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 3952106 |
|---|
| End bp | 3952579 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644837456 |
|---|
| Product | protein of unknown function Spy-related |
|---|
| Protein accession | YP_002988961 |
|---|
| Protein GI | 242240780 |
|---|
| COG category | [N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAAAT TAACTGCGGT TATGTTTGCC TCTGCTTTAG CCCTGGGTGC CACAGGCGTT
GTCTATGCGC AGGGAAATAC CGCTATGGAT TCGTCAGCGC CGATGATGCA GCACCATCGC
GGTGAACACG CTGGAAAAGG CATGGAACAG GATATGATGT TCCGTGGGTT GAATCTGACG
GAAGAACAGA AACAGAAAAT GCGCGATATC GTGCAGAATG CACGTAAAGG GGAACGCCCC
TCCGTTGAAG AACGCCGAGC GTTTCATAGC CTGATTGCCT CCGACAGCTT TGATTCGGCC
AAAGCCCAAG GTCTGGTGGA TAAGATGACG GAAAACAAAA AAGCCCGTTT GCTGCAGCGT
CTGGAAATCC AGAACAAAAT GTATAATGTG CTGACGGCGG AACAGAAAAA AGTGTTTAAC
GATAATTTCG AAAAACACAT GAATGAACCG ATGCCGCCAA AAGCGCCTCA GTAA
|
|---|
| Protein sequence | MSKLTAVMFA SALALGATGV VYAQGNTAMD SSAPMMQHHR GEHAGKGMEQ DMMFRGLNLT
EEQKQKMRDI VQNARKGERP SVEERRAFHS LIASDSFDSA KAQGLVDKMT ENKKARLLQR
LEIQNKMYNV LTAEQKKVFN DNFEKHMNEP MPPKAPQ
|
|---|
| |