Gene Dd703_3352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3352 
Symbol 
ID8089304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3925606 
End bp3927570 
Gene Length1965 bp 
Protein Length654 aa 
Translation table11 
GC content49% 
IMG OID644837430 
ProductATP-dependent metalloprotease FtsH 
Protein accessionYP_002988936 
Protein GI242240755 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0465] ATP-dependent Zn proteases 
TIGRFAM ID[TIGR01241] ATP-dependent metalloprotease FtsH 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.88182e-06 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTGACA TGGCGAAAAA CCTGATTCTC TGGTTGGTCA TTGCGGTGGT GCTGATGTCC 
GTATTCCAGA GCTTTGGGCC CAGCGAGTCG AATGGCCGTA GGGTGGATTA TTCAACCTTT
TTAACGGAAG TGAATCAGGA TCAGGTCCGT GAAGCACGCA TTAACGGACG CGAGATTAAT
GTTGTCAAAA AAGACAGCAG CCGATACACC ACATATATCC CTGTCCAAGA TCCCAAGTTG
CTGGATAACC TCCTGACCAA AAGTGTGAAA GTGGTTGGTG AACCTCCTGA GGAGCAAAGC
TTCCTGGCGA CCATCTTCAT TTCGTGGTTC CCGATGCTGT TGTTGATTGG CGTTTGGATT
TTCTTCATGC GTCAGATGCA GGGCGGTGGT GGTAAAGGGG CTATGTCTTT TGGTAAAAGC
AAGGCACGCA TGCTTACTGA AGATCAGATA AAGACGACTT TTGCCGATGT TGCTGGATGT
GACGAAGCAA AAGAAGAGGT CGCTGAACTG GTTGAGTATT TGCGTGAACC CAGCCGTTTT
CAGAAATTAG GCGGTAAGAT TCCTAAAGGC ATTTTAATGG TTGGTCCTCC TGGGACTGGT
AAAACCTTAT TGGCTAAGGC CATAGCTGGC GAAGCTAAAG TACCTTTCTT TACTATTTCT
GGTTCTGATT TTGTCGAGAT GTTCGTTGGT GTCGGTGCTT CCCGTGTTCG AGATATGTTC
GAGCAGGCCA AGAAAGCGGC ACCCTGCATC ATCTTTATCG ATGAAATCGA TGCTGTCGGT
CGTCAACGTG GTGCTGGTCT TGGCGGCGGT CATGATGAAC GCGAACAGAC GCTGAATCAG
ATGCTGGTGG AAATGGACGG TTTTGAAGGT AATGAAGGCA TTATTGTAAT TGCTGCTACT
AACCGCCCTG ATGTTCTTGA CCCGGCGTTG CTCCGGCCGG GCCGATTTGA CCGGCAGGTT
GTTGTCGGGC TGCCGGATGT ACGTGGGCGT GAACAGATTC TTAAAGTCCA TATGCGCCGG
GTTCCTTTGT CTCCTGACAT TGATGCCTCT GTGATTGCAC GAGGTACCCC AGGCTTTTCT
GGTGCTGATT TGGCGAATCT GGTGAATGAG GCTGCATTGT TTGCTGCACG TGGAAACAAG
CGTGTGGTCT CTATGGTTGA GTTCGAAAAG GCGAAAGACA AAATTATGAT GGGGGCTGAG
CGTCGTTCCA TGGTGATGAC GGAAGCTCAA AAAGAGTCAA CGGCCTACCA CGAAGCTGGC
CATGCCATCA TTGGTCGCCT TGTTCCTGAA CATGATCCGG TTCATAAGGT TACAATTATT
CCTCGTGGTC GAGCTCTGGG GGTTACGTTC TTCCTGCCGG AAGGCGATGC GATTAGTGCA
AGTCGTCAGA AGTTAGAAAG CCAGATTTCC ACCTTGTATG GTGGTCGTCT GGCCGAAGAG
ATCATTTATG GTGTTGAACA CGTATCTACC GGCGCATCAA ATGATATTAA AGTCGCGACT
TCGATTGCAC GTAACATGGT GACTCAATGG GGGTTCTCCG AAAAATTGGG GCCGTTATTG
TATGCTGAAG AAGAGGGCGA AGTTTTCCTC GGGCGCTCTG TGGCTAAAGC CAAGCATATG
TCCGATGAGA CAGCTAGGAT TATCGATCAG GAAGTTAAAT CTTTGATCGA TAGAAACTAT
AGACGGGCTC GTGAGTTGCT GATGGCCAAC ATGGATATTT TGCATTCCAT GAAAGATGCG
TTGATGAAAT ATGAAACCAT TGATGCACCT CAGATTGACG ACCTCATGGC ACGTAAGGAT
GTTCGTCCGC CTGCTGGTTG GGAAGAACCC GGCTCTACAA CTGGTGGCAG CAATTCCTCT
GATAACAGCG GAAGCGCCCC GAAAGCATCT TCGTCAGGCG ATGAACAACG TCCCTCTGAT
ACGGGAACGG ACAACACAAT GTCTGGTCCG ATTAATGATA AATAA
 
Protein sequence
MSDMAKNLIL WLVIAVVLMS VFQSFGPSES NGRRVDYSTF LTEVNQDQVR EARINGREIN 
VVKKDSSRYT TYIPVQDPKL LDNLLTKSVK VVGEPPEEQS FLATIFISWF PMLLLIGVWI
FFMRQMQGGG GKGAMSFGKS KARMLTEDQI KTTFADVAGC DEAKEEVAEL VEYLREPSRF
QKLGGKIPKG ILMVGPPGTG KTLLAKAIAG EAKVPFFTIS GSDFVEMFVG VGASRVRDMF
EQAKKAAPCI IFIDEIDAVG RQRGAGLGGG HDEREQTLNQ MLVEMDGFEG NEGIIVIAAT
NRPDVLDPAL LRPGRFDRQV VVGLPDVRGR EQILKVHMRR VPLSPDIDAS VIARGTPGFS
GADLANLVNE AALFAARGNK RVVSMVEFEK AKDKIMMGAE RRSMVMTEAQ KESTAYHEAG
HAIIGRLVPE HDPVHKVTII PRGRALGVTF FLPEGDAISA SRQKLESQIS TLYGGRLAEE
IIYGVEHVST GASNDIKVAT SIARNMVTQW GFSEKLGPLL YAEEEGEVFL GRSVAKAKHM
SDETARIIDQ EVKSLIDRNY RRARELLMAN MDILHSMKDA LMKYETIDAP QIDDLMARKD
VRPPAGWEEP GSTTGGSNSS DNSGSAPKAS SSGDEQRPSD TGTDNTMSGP INDK