| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3342 |
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| Symbol | |
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| ID | 8089292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | - |
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| Start bp | 3913285 |
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| End bp | 3915453 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644837418 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_002988926 |
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| Protein GI | 242240745 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGATG AAGAAAGACA TGGCGTACCT CTGGTGAAGG ATATTATTTT GCTTAATCCG
ATCGTGCGTA AGTTCCAGTA TGGTCAGCAT ACTGTAACAC TAGAAACCGG TATGATGGCT
CGTCAGGCCA CTGCCGCTGT AATGGTCAGC ATGGACGATA CGGCGGTATT TGTGACCGTC
GTCGGCGCTA AACATGTTAA ACCAGGTCAG GATTTTTTCC CGCTGACTGT CAACTATCAG
GAACGTACCT ATGCTGCGGG CCGTATCCCA GGCGGGTTCT TCCGTCGTGA AGGGCGTCCG
AGCGAAGGCG AGACACTGAT CTCCCGTCTT ATCGACCGTC CGATCCGTCC GTTATTCCCG
GATGGTTTTT TCAATGAAGT TCAGGTGATC GCGACTGTTG TGTCCGTGAA TCCGCAGATT
AGCCCTGATA TCGTTGCTAT GATCGGCGCC TCTGCCGCCC TGAGTTTGTC CGGTATTCCG
TTCAATGGTC CGATCGGTGC CGCTCGTGTG GGTTATATCA ACGATCAGTA TGTGCTGAAC
CCGACTCAGG ACGAGCTGAA GCAAAGCCGT CTGGATCTGG TCGTTGCCGG TACTGAAGGC
GCTGTGCTGA TGGTTGAATC TGAAGCTGAT TTGCTGACGG AAGACCAGAT GCTGGGTGCA
GTGGTTTTCG GTCACGAGCA ACAGCAAGTG GTTATCGAAA ACATCAAGTC CTTGGTTGCT
GAAGCCGGTA AATCCAAGTG GGACTGGCAG CCGCCGGAAG TCAACGTTGA GCTGCAAAAC
CGCGTTAAAG TGTTATCTGA AGCTCGTCTT GGCGATGCGT ATCGCATTAC CGAAAAACAG
GAGCGTTATG CTCAGGTTGA TGCTATCAAG TCTGACGTCG TCACAGGTTT GCTGGCGGAA
GATGACACAC TGGACGACAA CGAAATCCGC GATATTCTCG GCAGCATTGA AAAGAATGTG
GTTCGTAGTC GTGTCCTGCG TGGGGAACCG CGGATTGATG GCCGAGAAAA AGACATGATT
CGCGGCTTGG ACGTTCGTAC CGGTGTTCTG CCTCGTACCC ATGGATCCGC GCTGTTCACC
CGTGGTGAGA CTCAGGCGCT AGTGACTGCA ACGCTGGGTA CCGAACGCGA TGCTCAGATC
ATCGATGAAC TGATGGGTGA ACGTACTGAT CGTTTTCTGC TGCACTACAA CTTCCCTCCG
TATTCTGTCG GTGAAACCGG TATGGTGGGA TCGCCCAAAC GCCGTGAGAT TGGTCATGGC
CGTTTGGCCA AACGTGGCGT GTTGGCTGTG ATGCCGAAGC CTGAAGCATT CCCGTATACA
GTCCGCGTGG TTTCTGAAAT TACTGAATCC AATGGCTCCT CCTCCATGGC TTCCGTATGT
GGCGCCTCTC TGGCATTGAT GGATGCTGGC GTGCCGATCA AAGCTGCTGT TGCTGGTATA
GCCATGGGGC TGGTGAAGGA AGGCGACAGT TATGTCGTAT TGTCCGATAT CCTGGGTGAT
GAAGACCACT TGGGTGATAT GGACTTTAAA GTTGCTGGCA GCCGCGAGGG TGTCACCGCT
CTGCAAATGG ATATCAAGAT TGAAGGTATC ACACGTGAAA TCATGCAGGT TGCCTTGAAT
CAGGCCAAGG GTGCGCGTTT GCATATCCTG GGTGTGATGG AGCAGGCTAT CAGCACACCG
CGTGGCGAGA TTTCCGAATT TGCTCCACGT ATCCATACCA TCAAGATCAG TACCGATAAG
ATCAAAGATG TTATTGGGAA AGGTGGTTCC GTCATTCGCG CGTTGACCGA AGAAACCGGC
ACGACCATCG AGATCGAAGA TGACGGTACA GTGAAGATCG CCTCCAGTGA TGGCGACAAG
GCTCGCGAAG CTATTCGTCG TATCGAAGAG ATCACTGCTG AAATCGAAGT GGGTCGCATT
TATCAGGGTA AAGTGACGCG CATCGTAGAC TTTGGCGCTT TTGTCGCTAT CGGCGGTGGT
AAAGAAGGTC TGGTGCATAT TTCTCAGATT GCTGACAAGC GCATCGAGAA AGTCGCCGAT
TATCTGCAAT TGGGTCAGGA AGTCCCGGTT AAGGTACTGG AAGTTGATCG TCAAGGGCGT
GTCCGCCTGA GCATTAAAGA AGCTACTGTT CAATCTCAGG AAATAACTCC GGTTTCTGAA
GCGGAATAA
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| Protein sequence | MQDEERHGVP LVKDIILLNP IVRKFQYGQH TVTLETGMMA RQATAAVMVS MDDTAVFVTV
VGAKHVKPGQ DFFPLTVNYQ ERTYAAGRIP GGFFRREGRP SEGETLISRL IDRPIRPLFP
DGFFNEVQVI ATVVSVNPQI SPDIVAMIGA SAALSLSGIP FNGPIGAARV GYINDQYVLN
PTQDELKQSR LDLVVAGTEG AVLMVESEAD LLTEDQMLGA VVFGHEQQQV VIENIKSLVA
EAGKSKWDWQ PPEVNVELQN RVKVLSEARL GDAYRITEKQ ERYAQVDAIK SDVVTGLLAE
DDTLDDNEIR DILGSIEKNV VRSRVLRGEP RIDGREKDMI RGLDVRTGVL PRTHGSALFT
RGETQALVTA TLGTERDAQI IDELMGERTD RFLLHYNFPP YSVGETGMVG SPKRREIGHG
RLAKRGVLAV MPKPEAFPYT VRVVSEITES NGSSSMASVC GASLALMDAG VPIKAAVAGI
AMGLVKEGDS YVVLSDILGD EDHLGDMDFK VAGSREGVTA LQMDIKIEGI TREIMQVALN
QAKGARLHIL GVMEQAISTP RGEISEFAPR IHTIKISTDK IKDVIGKGGS VIRALTEETG
TTIEIEDDGT VKIASSDGDK AREAIRRIEE ITAEIEVGRI YQGKVTRIVD FGAFVAIGGG
KEGLVHISQI ADKRIEKVAD YLQLGQEVPV KVLEVDRQGR VRLSIKEATV QSQEITPVSE
AE
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