Gene Dd703_3333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3333 
Symbol 
ID8089283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3903541 
End bp3904320 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content59% 
IMG OID644837409 
Productdeoxyribose-phosphate aldolase 
Protein accessionYP_002988917 
Protein GI242240736 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0274] Deoxyribose-phosphate aldolase 
TIGRFAM ID[TIGR00126] deoxyribose-phosphate aldolase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.451413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAT TAACTACCGT GGCGCAGCGT GCGCTGGGGC TGATGGACTT GACCACACTG 
AATGACGACG ATACCGATGA AAAGGTGATT GCTCTGTGTC GTCAGGCCAG CAGCCCGGCG
GGAAAAACCG CCGCCGTCTG CATTTATCCG CGTTTTGTGC CGCTGGCGCG TAAGACGCTG
TGCGAGCAGG GAACGCCGGA GGTGCGTATT GCCACCGTCA CTAATTTTCC GCACGGTAAT
GACGACATCG ACGTCGCGCT GGCTGAAACC CGCGCCGCTA TTGCTTATGG GGCGGACGAG
GTGGATGTGG TGTTCCCGTA TCGGGCGCTG ATGGCGGGCA ACCGTCAGGT CGGTTTCGAA
CTGGTGACAG CCTGTAAAGA AGCGTGTGCG GCGGCGGGCG TATTACTCAA GGTGATTATC
GAAACCGGCG AATTGAAGAC CGAAGCGCTG ATTCGTCAGG CCAGTGAAAT CGCTATCGAT
GCCGGAGCGG ATTTTATCAA AACCTCTACC GGCAAGGTGG CGGTCAACGC GACGCTGCAA
TCAGCGGAAA TCATGCTGAA AGTGATTCGT GACAAAGGCG TGGGCGAGAA CGTCGGGTTC
AAACCGGCCG GCGGCGTGCG TACTGCGGAG GATGCCGCCC AGTACCTGCA ACTTGCCGAC
GCTATCATGG GCGCCGGGTG GGCTGATGCC CGTCATTTCC GGTTCGGCGC GTCGGGCCTG
TTGGGCAGCC TGTTGACGGT ACTGGGCCAT AGCGCTTCCG CCAGCCGCAG CAACTATTAA
 
Protein sequence
MTELTTVAQR ALGLMDLTTL NDDDTDEKVI ALCRQASSPA GKTAAVCIYP RFVPLARKTL 
CEQGTPEVRI ATVTNFPHGN DDIDVALAET RAAIAYGADE VDVVFPYRAL MAGNRQVGFE
LVTACKEACA AAGVLLKVII ETGELKTEAL IRQASEIAID AGADFIKTST GKVAVNATLQ
SAEIMLKVIR DKGVGENVGF KPAGGVRTAE DAAQYLQLAD AIMGAGWADA RHFRFGASGL
LGSLLTVLGH SASASRSNY