Gene Dd703_3288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3288 
Symbol 
ID8089234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand+ 
Start bp3851844 
End bp3852401 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content45% 
IMG OID644837360 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_002988872 
Protein GI242240691 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATAT TCGATACGCA AATCCCCGAT ATCAAGATCA TTGAACCAAC GGTATTTGGT 
GACGAGCGGG GTTTTTTCAT GGAAACGTGG CATCAAAAAA GATTTGAAGA TCTTGTCACG 
CAACGACCAT GCCGTTTTGT CCAGGATAAC CACTCAAAAT CCAGGAAAGG AATTCTACGC 
GGGTTACACT ACCAGACAGA AAACCCACAG GGAAAACTCG TTCGCGTTAT TGCCGGTGAA 
GTGTTTGATG TGGCCGTAGA TATCCGCAAG AACTCCCCAA CGTTCGGCCA ATCGGTCGGC 
GTCTACCTGT CCGCGCAAAA TAAACGTCAA TTATGGATTC CAGCCGGGTT CGCTCACGGT 
TTTTACGTCA CCAGCGATGA GGCTGAATTC GTTTATAAAT GTACCGATTA TTACAATCCC 
AATGCTGAAC ACTGCATTAT CTGGAATGAT GAATCGCTCA ATATCGATTG GCCAATAGAA 
AACGAGATGG TCATACTTTC CGCCAAAGAT GAGCAGGGCA AAAAATTCCA GGATATTCCG 
CCACAAAACT TGATGTAA
 
Protein sequence
MNIFDTQIPD IKIIEPTVFG DERGFFMETW HQKRFEDLVT QRPCRFVQDN HSKSRKGILR 
GLHYQTENPQ GKLVRVIAGE VFDVAVDIRK NSPTFGQSVG VYLSAQNKRQ LWIPAGFAHG 
FYVTSDEAEF VYKCTDYYNP NAEHCIIWND ESLNIDWPIE NEMVILSAKD EQGKKFQDIP 
PQNLM