Gene Dd703_3273 details

Gene Information

• Locus tag: Dd703_3273
• ID: 8089219
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: +
• Start bp: 3833312
• End bp: 3835198
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 644837345
• Product: polysaccharide biosynthesis protein CapD
• Protein accession: YP_002988857
• Protein GI: 242240676
• COG category: [G] Carbohydrate transport and metabolism; [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1086] Predicted nucleoside-diphosphate sugar epimerases

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTAAAC TTATTCCGCT TTTGCTTAAT GCAGAACGCG CCACCAAACG CATCGTAACT 
GTACTCTATG ATGTTGTCGC AATTACTATT TCGCTCTATC TGGCCGTTGC CGTCCGTTTA 
GGCACCACCG ATTTCCCCAT CGGTTATGCT GAGATAGCCA GCTTCGTCGT CACGTTATCC 
ATCACTATCT TCGTTTTCAT ACGCTGCGGT ATGTACCGTG CCGTACTGCG CTACATGATG 
CTACCCGCTA TAGGATATGT GTTTTTGTCT GTCTTCCTAT CCGCCATCAG TCTGGCGCTA 
AGTAGCTTCT TTTTTCAGTC TTTTGTTCCG CGCAGCGTCC CGTTTATTTA TGCAGGTTTA 
GCGACGCTTG CGCTGGGTAG CCCTCGCGTA CTTATCCGAA CATTTTATTA CCACTACTAT 
AAGCGTCAGA AACCAAACGT TTTTATCTAT GGCGCCGGCG CTACCGGGCG AGACTTGCTC 
TACGCTCTGA TTCAGGGAGA TGAGTATCAT CCCGTCATTA TCCTGGATGA TGACGAGAAA 
AAGATTGGTC AAATTATTTG CGGCATAAAA GTGCATCACA GCAGTGAATT TGAGAAATTG 
AAACCGTTGT ATCACCCGGT TAAATTATTA TTAGCCATCA ACAATATACA AAAAGGTCAA 
CGTCTGAGAT TGCTGGAGAA ACTCTCTCAT TGGCCGATCG AAGTACAATC TGTCCCTGCG 
GTTGAAGACA TCGCAGCCGG TAAGGCTACC GCCACAGAAA TACGCGATCT GGATGTCGCT 
GATTTACTTG GAAGAGAAGC TGTTGATCCC GATAGACAGC TAATGGCGAA AAACATTACC 
AATAAATCAG TGATGGTGAC AGGTGCCGGC GGTTCAATTG GTTCCGAACT GTGCCGACAG 
ATTTTGACGC AACGGCCACG AATCTTGGTG CTGTTTGAGC TGAATGAGTA CAACCTATAT 
ACCATCGATC AGGAACTGCA AGGGATTAAA AAACGCCTGA TGCTGGCAAC AAAAATTGTT 
ACGGCACTCG GGTCGGTACA AAAGCAGAAC CGGATTCAAA AGCTAATCCA TGCCAACCAA 
ATCGAGACCA TCTATCATGC TGCAGCCTAT AAACACGTAC CGCTGGTTGA AGACAATGTG 
ATCGAAGGGA TTCGCAATAA TGTTTTCGGT ACCTTAGCCT GCGCCGAAGC CGCAATAGCG 
GAAGGAGTCA AAAACTTCAC GCTGATCTCT ACCGACAAAG CTGTGCGCCC GACCAATATT 
ATGGGTGCCA GTAAACGGAT GGCAGAATTA ATTTTGCAAG CACTGGCTGA ACGGCAAAAC 
CCGACAACAT TCACCATGGT GCGTTTCGGC AATGTATTAG GCTCATCAGG TTCCGTCGTC 
CCGCTGTTTA AAAAACAGAT CCGACAAGGT GGCCCGGTAA CAGTCACCCA CCCAGATATT 
ATCCGTTACT TCATGTTAAT TCCTGAAGCG GCACAACTGG TAATACAAGC GGGCGCCATG 
GGGATTAATG GACAGGTATT TGTATTAGAT ATGGGAGAGC CAGTCAAAAT ACTCGACCTG 
GCCCGCAGAA TGATTAACCT AATGGGCATG AAAGGGTATA TAGAAGGACA GGGGCACGTT 
GAAGAAGGCG ATATAGCGAT TAAATTCACG GGATTACGCC CTGGGGAAAA ACTCTATGAG 
GAGTTATTGA TCGGTGAAAA TGTGGAAGGA ACTAGCCATC CCAAAATCAT GACCGCACAA 
GAAGAAAAAT TGAGCTGGCA GGACATGGAG TCATTACTGA AAGATCTTGA TATGTATTGC 
CACGACTTCG ACGTTAATAA AATTAAAGAG ATTCTGCTAC AGGCACCAAC AGGTTATAAC 
ATCGAGTGTT ATAGAGATCC TCATTGA 

 

Protein sequence

MFKLIPLLLN AERATKRIVT VLYDVVAITI SLYLAVAVRL GTTDFPIGYA EIASFVVTLS 
ITIFVFIRCG MYRAVLRYMM LPAIGYVFLS VFLSAISLAL SSFFFQSFVP RSVPFIYAGL 
ATLALGSPRV LIRTFYYHYY KRQKPNVFIY GAGATGRDLL YALIQGDEYH PVIILDDDEK 
KIGQIICGIK VHHSSEFEKL KPLYHPVKLL LAINNIQKGQ RLRLLEKLSH WPIEVQSVPA 
VEDIAAGKAT ATEIRDLDVA DLLGREAVDP DRQLMAKNIT NKSVMVTGAG GSIGSELCRQ 
ILTQRPRILV LFELNEYNLY TIDQELQGIK KRLMLATKIV TALGSVQKQN RIQKLIHANQ 
IETIYHAAAY KHVPLVEDNV IEGIRNNVFG TLACAEAAIA EGVKNFTLIS TDKAVRPTNI 
MGASKRMAEL ILQALAERQN PTTFTMVRFG NVLGSSGSVV PLFKKQIRQG GPVTVTHPDI 
IRYFMLIPEA AQLVIQAGAM GINGQVFVLD MGEPVKILDL ARRMINLMGM KGYIEGQGHV 
EEGDIAIKFT GLRPGEKLYE ELLIGENVEG TSHPKIMTAQ EEKLSWQDME SLLKDLDMYC 
HDFDVNKIKE ILLQAPTGYN IECYRDPH