| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_3215 |
|---|
| Symbol | |
|---|
| ID | 8089160 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 3767627 |
|---|
| End bp | 3768865 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644837288 |
|---|
| Product | manganese transport protein MntH |
|---|
| Protein accession | YP_002988800 |
|---|
| Protein GI | 242240619 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
|---|
| TIGRFAM ID | [TIGR01197] NRAMP (natural resistance-associated macrophage protein) metal ion transporters |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00440614 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGGGA GTCGTGTAGT GGAATCAGTC AGCCGTACAT CGAGAAAGCT TAAGCTTTCA
TTGATGGGGC CGGCCTTTAT CGCGGCGATC GGTTATATCG ATCCCGGTAA TTTCGCCACC
AATATTCAAT CTGGTGCTGC TTATGGCTAC CAGTTGCTGT GGGTTGTCGT TTGGGCGAAT
TTAATGGCTA TGCTCATTCA GTTGCTTTCC GCCAAGCTCG GTATCGCTAC CGGGAAAAAC
CTGGCGGAAC ACATCCGAGA TCGTTTTCCT CGCCCTGCAG TCTGGTTTTA CTGGGTTCAG
GCAGAGATCA TCGCCATGGC GACCGATCTG GCGGAGTTTA TCGGCGCTGC GGTGGGGTTC
AAATTATTGC TGGGTATTTC GCTGCTGGAA GGCGCGATTC TGACCGGTAT TGCAACCTTT
CTCATCCTCA CGCTGCAACA ACGCGGCCAG AAGCCTCTCG AGATGGTGAT CGGCGGGTTG
CTGATGTTTG TCGCGGCGGC GTATATCGTC GAACTGATTT TCTCCAGCCC GCAATTGGCG
CCGTTAGCGA AAGGAATGGC GATCCCCAAT CTGCCGTCGT CCGATGCTGT AATGCTGGCG
GCGGGGGTGT TGGGGGCAAC TATTATGCCT CACGTTATCT ACCTGCATTC GTCGTTAACA
CAGCAAAAAA GCAGCGATAC GCATGCGGAG CGTTATGCAG CCACTAAAGT CGATGTGGCT
GTGGCGATGA CAATCGCCGG CTTTGTCAAC CTGGCGATGA TGGCGACCGC CGCCGCGGCG
TTCCATTTTA GCGGTAATGC TTCTGTTGCC GAGCTTGAAC AAGCCTATCT GACGTTGAAA
CCTCTGCTTG GCCAGGCTGC CGCTACTATG TTCGGATTGA GCCTGGTTGT CGCCGGTCTT
TCCTCCACCG TGGTAGGAAC GTTGGCCGGC CAGGTAGTGA TGCAGGGATT TGTCCGGTTC
AGCATTCCGT TATGGGTACG TCGCATTGTC ACTATGCTGC CTTCATTCAT CGTGATTATG
TTTGGAATGG ATCCGACGCG AGTTCTGGTA CTGAGTCAGG TTCTTCTGAG CTTCGGTATT
GCGCTGGCGC TAATCCCGTT GTTAGCGTTT ACCGGCAATC GTGAACTGAT GGGGGGGCTG
GTGAACAGCC GTTTGGTGCA GAATATTGGC AGAATCATTG TCTGCGTAGT TATCGCCCTC
AATCTTTATC TGTTGGTGGA TACTCTGCTG GGAAGGTAG
|
|---|
| Protein sequence | MPGSRVVESV SRTSRKLKLS LMGPAFIAAI GYIDPGNFAT NIQSGAAYGY QLLWVVVWAN
LMAMLIQLLS AKLGIATGKN LAEHIRDRFP RPAVWFYWVQ AEIIAMATDL AEFIGAAVGF
KLLLGISLLE GAILTGIATF LILTLQQRGQ KPLEMVIGGL LMFVAAAYIV ELIFSSPQLA
PLAKGMAIPN LPSSDAVMLA AGVLGATIMP HVIYLHSSLT QQKSSDTHAE RYAATKVDVA
VAMTIAGFVN LAMMATAAAA FHFSGNASVA ELEQAYLTLK PLLGQAAATM FGLSLVVAGL
SSTVVGTLAG QVVMQGFVRF SIPLWVRRIV TMLPSFIVIM FGMDPTRVLV LSQVLLSFGI
ALALIPLLAF TGNRELMGGL VNSRLVQNIG RIIVCVVIAL NLYLLVDTLL GR
|
|---|
| |