Gene Dd703_3140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3140 
Symbol 
ID8088437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3687163 
End bp3688341 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content62% 
IMG OID644837214 
ProductOrn/DAP/Arg decarboxylase 2 
Protein accessionYP_002988726 
Protein GI242240545 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCCG CCGTTTACCA GACCCTGAGC CGGTTGCAGT CATCGCGCAC CGCCCCTTTC 
TGCGCCTATG TTTATGATTT ATCAGCGCTG CATGCACATG CGTCCGCCAT GAAGGCGGCG
CTGCCGCCCG GCTGCGAACT GTTCTATGCC GCCAAGGCCA ACCCGGATGC CGCCATCCTC
ACCACGTTGG CGGACAGCGT GGACGGTTTT GAAGCCGCGT CCGGCGGCGA GTTGTCTTGG
CTGACGGAAC AGGTGCCCGG CCGCCGGTTG ATTTTCGGCG GCCCCGGCAA ACTGCCCGCA
GAACTGGAGC AGGCGGTTGC GCAGCGGATT GATGCGCTGC ATGTGGAAAG CCTGAACGAG
CTGCAACGGC TGGAACAGTG CGCCGAACGG CTGGCGACGC CGGTCAACAT CATGCTGCGC
ATGAATATTC CGCTGGAGGG CGTGACCGGC ACCCGGCTGA TGATGGGCGG TAAACCGACG
CCATTCGGCC TTGATGTCGC CGAACTGCCC GCAGCCATCG CCCGTATCAA AGCCAGCCGC
GGGCTGAAAT TACAGGGATT CCACTTTCAC CTGATGTCGC ATCAGCTGGA GGTGGCAACG
CACCTGTCGC TGATGCGCCG CTACCTCGAC ACCGTGCATC AGTGGCAGCG GCAATTCGAT
ATTCAGGTAC CGGTGGTGAA CGTCGGCGGC GGCATCGGCA TTAACTATCT CGATCCGCAG
CGCCATTTCG ACTGGCAGGA TTTCTGCCGC CAGTTGCCGC AAGTCATTGC ACAAACCGGC
AGCCACGGGT TGCGGTTGCG CTTTGAATGC GGCCGCTACG TGAGCGCCGC CTGCGGTTAT
TACGTGATGG AGGTGCTGGA TGTGAAAAAA AATCTTGGGG AATGGTTCGC CATCGCACAC
GGCGGCACCC ACCACTTCCG CACGCCGGCG GCGCAGGGCC ATAACCACCC GTTTAGCGTA
CTGCGCCGTG AACACCTGCC GCCGACGGTA GAACAGCAAC CGATCACGCT GGTCGGCCAG
CTCTGCACCC CCAAAGATGT GCTGGCACGC CAGCAGCCTG TTGCGGCGCT GGCGCCGGGC
GACTGGCTGG TATTCCACCT CGCCGGCGCC TATGCCTGGA ATATATCCCA CCAGAATTTC
CTGATGCATG CGCCGCCGGA AATGATTTAT CTGCCATAA
 
Protein sequence
MTPAVYQTLS RLQSSRTAPF CAYVYDLSAL HAHASAMKAA LPPGCELFYA AKANPDAAIL 
TTLADSVDGF EAASGGELSW LTEQVPGRRL IFGGPGKLPA ELEQAVAQRI DALHVESLNE
LQRLEQCAER LATPVNIMLR MNIPLEGVTG TRLMMGGKPT PFGLDVAELP AAIARIKASR
GLKLQGFHFH LMSHQLEVAT HLSLMRRYLD TVHQWQRQFD IQVPVVNVGG GIGINYLDPQ
RHFDWQDFCR QLPQVIAQTG SHGLRLRFEC GRYVSAACGY YVMEVLDVKK NLGEWFAIAH
GGTHHFRTPA AQGHNHPFSV LRREHLPPTV EQQPITLVGQ LCTPKDVLAR QQPVAALAPG
DWLVFHLAGA YAWNISHQNF LMHAPPEMIY LP