Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_2970 |
Symbol | lpxD |
ID | 8089803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 3460856 |
End bp | 3461878 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644837052 |
Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
Protein accession | YP_002988567 |
Protein GI | 242240386 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000180027 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTCAA TTCGACTGGA CGCCTTGGCT CAACAGTTGG ATGCACAGTT GCACGGTGAT GGCGATATCG TCATCACCGG TGTGGCTTCG ATGCGGTCCG CCCAGGCAGG TCAGATTACT TTTTTGTCCG ATACCCGCTA TCGTGAGCAA CTGGCGAGTA CGAATGCTTC GGCGGTTGTA CTGACAGAGG CCGATGTGCC TTTTTGCAAT GTTGCCGCTC TGGTGGTGAA GAATCCTTAT TTGACCTATG CGCGTATGGC ACAGTTGATG GATACAACGC CAACGCCGGC ACAGGACATT TCGCCTTCTG CGGTGATTGC TCCTGATGCG CGTTTAGGAG ATGGGGTTTC TGTTGGCGCC AATGCTGTTA TTGAGTCTGG TGCGATACTG GGCGAGGGTG CAGTGATTGG CGCTGGCTGC TTTATTGGTA AACAAGCCCG TATCGGGGCT GGCACCCGGT TATGGGCAAA TGTAGTGGTT TACCATAATG TTGTTTTGGG TGAGCAGTGT TTGATCCAGT CTGGCGCTGT GATTGGTTCG GATGGCTTTG GCTATGCCAA CGATCGCGGC AATTGGGTCA AAATACCACA ACTAGGGACG GTTATAATCG GTGATCGCGT TGAGATCGGG GCAAATACCA CCATCGATCG CGGCGCATTG GATGATACGA TCATCGGCAA TGGTGTCATC ATCGATAACC AATGTCAGAT TGCACACAAC GTTGTGATTG GTGACAATAC CGCAGTTGCT GGTGGTGTGA TTATGGCCGG AAGCTTGAAA ATCGGTCGTT ATTGCATGAT TGGTGGTGCC AGCGTGATTA ATGGTCACAT GGAAATTTGT GACAAAGTCA CGGTGACGGG AATGGGGATG GTCATGCGGC CTATTACCGA ACCTGGAGTG TATTCTTCAG GCATTCCATT GCAGCCCAAC AAAGTCTGGC GTAAGACCGC AGCACTGGTA ATGAATATTG ATGATATGAG CAAACGGCTC AAAGCTCTGG AGCGTAAGCT TCAGGAGGAT TAA
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Protein sequence | MLSIRLDALA QQLDAQLHGD GDIVITGVAS MRSAQAGQIT FLSDTRYREQ LASTNASAVV LTEADVPFCN VAALVVKNPY LTYARMAQLM DTTPTPAQDI SPSAVIAPDA RLGDGVSVGA NAVIESGAIL GEGAVIGAGC FIGKQARIGA GTRLWANVVV YHNVVLGEQC LIQSGAVIGS DGFGYANDRG NWVKIPQLGT VIIGDRVEIG ANTTIDRGAL DDTIIGNGVI IDNQCQIAHN VVIGDNTAVA GGVIMAGSLK IGRYCMIGGA SVINGHMEIC DKVTVTGMGM VMRPITEPGV YSSGIPLQPN KVWRKTAALV MNIDDMSKRL KALERKLQED
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