| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2909 |
|---|
| Symbol | |
|---|
| ID | 8089742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 3392048 |
|---|
| End bp | 3392650 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644836991 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_002988506 |
|---|
| Protein GI | 242240325 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0450] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCCTGG TAACTCGTCC TGCCCCCGAC TTCACTGCAG CTGCCGTATT GGGAAGCGGG
GAAATCGTTG AAAATTTCAA CCTGAAAAAG CACATCAACG GTAAACCGGC CGTGATCTTC
TTCTGGCCGA TGGATTTCAC GTTTGTATGC CCTTCAGAGC TGATCGCCTT CGATCACCGT
TATGAAGAAT TCCAGAAACG TGGCGTTGAA GTTGTTGGTG TTTCTTTCGA TTCCGAATTC
GTGCACAACG CCTGGCGCAG CACCCCGATC GAAAAAGGCG GTATCGGCCC GGTGAAATAT
GCCATGGTGG CGGACATCAA GCGTGATATC CAGCAAGCCT ACGGCATTGA GCACCCTGAT
GCGGGTGTCG CGCTGCGCGG ATCTTTCCTG ATTGATAAAA ACGGCATCGT GCGTCATCAG
GTGGTGAATG ATCTGCCGCT GGGCCGCAAC ATCGACGAAA TGCTGCGTAT GGTCGACGCG
CTGCAATTCC ACGAAGAGCA TGGCGAAGTT TGCCCGGCGC AGTGGGAAAA AGGGAAATCC
GGCATGGGCG CCTCTCCGGA CGGCGTGGCG AAATACCTGA AAGAGAACGC CAGTTCTCTG
TAA
|
|---|
| Protein sequence | MVLVTRPAPD FTAAAVLGSG EIVENFNLKK HINGKPAVIF FWPMDFTFVC PSELIAFDHR
YEEFQKRGVE VVGVSFDSEF VHNAWRSTPI EKGGIGPVKY AMVADIKRDI QQAYGIEHPD
AGVALRGSFL IDKNGIVRHQ VVNDLPLGRN IDEMLRMVDA LQFHEEHGEV CPAQWEKGKS
GMGASPDGVA KYLKENASSL
|
|---|
| |