Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_2906 |
Symbol | tgt |
ID | 8089739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 3388690 |
End bp | 3389853 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644836988 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_002988503 |
Protein GI | 242240322 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.905549 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGTACG AGTTGTTGAA AACCGACGGG CGCGCGCGCC GCGGCCGACT GGTGTTCGAG CGTGGCGTGG TGGAAACCCC GGCGTTTATG CCGGTGGGCA CTTACGGTAC CGTCAAGGGG ATGACGCCGG AAGAAGTCAA AGATACCGGC GCGCAGATCA TTCTGGGCAA CACGTTCCAC CTGTGGCTGC GTCCCGGTCA GGAAATCATG AAGCTGCACG GCGACCTGCA CGACTTCATG CAGTGGAAAG GCCCGATTCT GACCGACTCC GGCGGTTTTC AGGTTTTCAG CCTCGGTGAT ATCCGCAAGA TTACTGAAGA GGGGGTGCAC TTTCGTAACC CCATCAACGG CGACGCCATT TTTCTCAGTC CCGAGAAATC GATGGAGATT CAGTACGATC TCGGTTCCGA TATCGTGATG ATTTTCGACG AATGTACGCC GTACCCGGCA GATTGGGATT ACGCTAAACG CTCGATGGAA ATGTCGCTGC GCTGGGCGCA ACGTAGCCGT CGGCGTTTTG ACGAACTGGG CAACCGGAAC GCGCTGTTCG GCATCATTCA GGGCAGTGTT TACGAAGATT TACGCGATAT CTCGGTAAAA GGTCTGGTAG ACATTGGTTT TGATGGTTAC GCTGTGGGCG GCCTGGCGGT CGGTGAGCCT AAGGCGGATA TGCACCGTAT TCTGGAGCAT GTTTGCCCGC AGATCCCGGC GGATAAACCC CGTTATCTGA TGGGCGTCGG CAAGCCGGAA GATCTGGTGG AAGGCGTGCG TCGCGGTATT GATATGTTCG ACTGCGTGAT GCCGACTCGC AATGCCCGTA ATGGCCATCT GTTTGTCACT GACGGCGTTG TAAAAATCCG CAATGCCAAG CACAAGGATG ACACTGGCCC TCTGGATGAA CACTGTGATT GCTACACATG TCGCAATTAC AGCCGTGCCT ACTTGCATCA TCTCGATCGT TGCAACGAAA TACTGGGCGC ACGCCTCAAT ACCATCCACA ACCTGCGTTA CTATCAGCGG CTGATGGCGG GTTTACGGCA GGCTATTGAG GAAGGTAAAT TAGAGGACTT TGCGGCGGCA TTTTATCAAC GTATTGGTAA GCCGGCTCCG CCGTTGGCGG ACAATTCGGC GGGCGATGAC CATGAAGGTC ATGTGTCGCA ATAA
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Protein sequence | MKYELLKTDG RARRGRLVFE RGVVETPAFM PVGTYGTVKG MTPEEVKDTG AQIILGNTFH LWLRPGQEIM KLHGDLHDFM QWKGPILTDS GGFQVFSLGD IRKITEEGVH FRNPINGDAI FLSPEKSMEI QYDLGSDIVM IFDECTPYPA DWDYAKRSME MSLRWAQRSR RRFDELGNRN ALFGIIQGSV YEDLRDISVK GLVDIGFDGY AVGGLAVGEP KADMHRILEH VCPQIPADKP RYLMGVGKPE DLVEGVRRGI DMFDCVMPTR NARNGHLFVT DGVVKIRNAK HKDDTGPLDE HCDCYTCRNY SRAYLHHLDR CNEILGARLN TIHNLRYYQR LMAGLRQAIE EGKLEDFAAA FYQRIGKPAP PLADNSAGDD HEGHVSQ
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