Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_2872 |
Symbol | |
ID | 8089705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 3350887 |
End bp | 3352767 |
Gene Length | 1881 bp |
Protein Length | 626 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644836954 |
Product | peptidyl-prolyl cis-trans isomerase (rotamase D) |
Protein accession | YP_002988469 |
Protein GI | 242240288 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGGACA ATTTACGCGC GGCCGCTAAC AACGTCGTGC TTAAAGTTAT TCTTGCTTTG ATCGTTGGTT CATTTGTATT GACTGGGGTA GGTGACTATC TGATCCGTGG TTCAGGTGAT TACGCCGCCA AGGTTAATGG TCAGGAAATC TCCCGCGCGC AGTTGGAACA GGCGGTACAA AATGAACGCA ACCGTCAACA GGAGATGTTG GGCGAGAATT TTTCCGCACT GGCTGCGAAC GAAGGGTATA TGCAGCAGTT GCGCAAACAA GCATTGAGCC AGTTGATCGA CGATACGTTA ATTGATCAAT TCGCCCGTAA TCTGGGGCTG AATATCAGTG ATGAACAGGT AAAACAGGCT ATTTTCTCTG TTCCCGCCTT CCAGACTAAT AATCGCTTTG ATAACGAAAA ATACCTTGCC CAGGTACAGC AATTAGGATT AACGCCGGAT GTCTATGCGC AACTGTTGCG CAAACAATTG GTGACGCAAC AGTTGGTTCG TGGTCTGGGC GGCAGTAATT TCCAGTTGCC GCAGGAGATC GACAATCTGG TCGCTATAGC AGCGCAGGAT CGTACTATCC GTACCGCGAC CATTGATTTG GATGCCCGGG CGAAAACCCA GACGGCTTCC GATGATGAAA TACAGAATTT CTACAACCAG AACAGCTCGC GCTACCTGGC GCCGGAGCAG TTCAAAGTCA GCTACATCAT GCTGGATGCC GCTGCCATCA TGGACAAAAT CTCGGTAGAT AGCGCGGCTG TCAGCAGTTA CTACGAGCAG CACAAGAGCG AATTCACTCA GCCGGAGCGT CGTAAATACA GCATTATTCA GTTAAAAAAT GAGGCTGATG CTAAAGCCGT ACTGGAACAG CTGCATAAAG GTGCGGATTT CGCCGCACTG GCGAAAGAGA AGTCAACGGA TATTGTATCC CGTCGCAATG GCGGCGATCT GGGGTGGATG GACGGCAATT CCACCGTTGA CGAGATTAAG CAAGCCAATC TACAGCAGAA AGGGCAGTTG TCTGATGTAG TTAAGTCATC TGTGGGGTAT CTGATCGTGC GTCTGGACGA CATCCAGGTG CAGCGTGTTC GTTCTCTGGA TGAGGTACGC GGTGATCTGG GTGATAAGGT TAAACGCGAA AAAGCATTGG ACGAGTTTTA CGCGCAACAG CAGAAGCTCA GTGAAGCGGC CAGCAATGAT AATGAATCGC TGGTTTCGGC GGAAAAAGCT TCTGGCATCA AAGCGCGTCA AACTGACTGG TTCACTCGCG ACAATATCCC CGCCGCGCTG GATTTTCCTC AGGTGAAACA GGCGATTCTG AACGGTACCC TGACTGGAGA AAATGGAGCG CCCGGTAGCA ACTCGGACGT TATTAATGTG GATGGCGATC GGGCTTTCGT TCTGCGTATC AGCGAACACA AACCGGAAGC TACCCAGCCG TTAGACAAGG TGCGTGACCA AGTTGTTCAG GCGATAAAGC GCCAGAAAGC CGAGCAGCAG GCGCGCGTTG ATGCCGAAAA GATTCTGGCT GACCTGAAGC AGGGCAAGAA TGACACGCTT ACCGCTGCTG GTCTCAGTTT CAGCGCCCCT CGGGTTATGT CTTCCGTCGG TCGCGGCGAT GTAATGTCAG AGGCCGTATT CTCTTTACCG CATCCGCAGA AGGACAAGGT GTCCTATGGG ATTGCCCAGG ATCAAGTCGG CAACATTGTG ATCGTGGCGC TGGATAATGT GAAGGCGCGT GAGCTTGAAG CCGCACAGAA GAAGCAATTT GCCGCTCAGA TAGAGCAGAG CGCTTTAGCG ACGCTGTTTG ATTCTCTGAT CGCCAATCTG CATGACGAAG CCAAGATAAA ACTGGGGGAT GCGGCGCAGG ACGCGCAATA G
|
Protein sequence | MMDNLRAAAN NVVLKVILAL IVGSFVLTGV GDYLIRGSGD YAAKVNGQEI SRAQLEQAVQ NERNRQQEML GENFSALAAN EGYMQQLRKQ ALSQLIDDTL IDQFARNLGL NISDEQVKQA IFSVPAFQTN NRFDNEKYLA QVQQLGLTPD VYAQLLRKQL VTQQLVRGLG GSNFQLPQEI DNLVAIAAQD RTIRTATIDL DARAKTQTAS DDEIQNFYNQ NSSRYLAPEQ FKVSYIMLDA AAIMDKISVD SAAVSSYYEQ HKSEFTQPER RKYSIIQLKN EADAKAVLEQ LHKGADFAAL AKEKSTDIVS RRNGGDLGWM DGNSTVDEIK QANLQQKGQL SDVVKSSVGY LIVRLDDIQV QRVRSLDEVR GDLGDKVKRE KALDEFYAQQ QKLSEAASND NESLVSAEKA SGIKARQTDW FTRDNIPAAL DFPQVKQAIL NGTLTGENGA PGSNSDVINV DGDRAFVLRI SEHKPEATQP LDKVRDQVVQ AIKRQKAEQQ ARVDAEKILA DLKQGKNDTL TAAGLSFSAP RVMSSVGRGD VMSEAVFSLP HPQKDKVSYG IAQDQVGNIV IVALDNVKAR ELEAAQKKQF AAQIEQSALA TLFDSLIANL HDEAKIKLGD AAQDAQ
|
| |