| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2866 |
|---|
| Symbol | |
|---|
| ID | 8089699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 3344172 |
|---|
| End bp | 3345956 |
|---|
| Gene Length | 1785 bp |
|---|
| Protein Length | 594 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644836948 |
|---|
| Product | putative multidrug transporter membraneATP-binding components |
|---|
| Protein accession | YP_002988463 |
|---|
| Protein GI | 242240282 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.749426 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCTT CCCGTTCATT ATGGCCCACG CTGAAACGGT TGTTGGCATA CGGTATACCG
TGGCGTAAAT CGCTTGGCGG GGGCGTGTTG TTGCTGTGGC TCGCGGCGGC GGCCGAGGTC
TCTGGGCCTG CGCTGGTCAG TTATTTTATC GACCATGTGA TCGCTCGGGG CGAGTTTCCT
GTTCAACTGG CGCTCGGGTT GGCGGTAGGG TACGTGGCGC TTCAGGCGCT GGCTGCGCTG
CTGCACTATG TACAGGCGCT GATGTTTAAT CGGGTGGCGG TTGGTGTTGT GCAGCAATTG
CGTACCGATG TGATGGATGC GGCGTTGCGG CAGCCGTTGG GAGTATTTGA TACGCAACCC
GTAGGGCAGT TGATTTCCCG AGTCACTAAC GATACCGAAG TTGTCAGAGA CCTGTACGTA
ATGGTGGTCG GCAGTGTGTT GCGAAGCACC GCGCTGATTG GCGCCATGCT GATAGCCATG
TTCAGCCTCG ATTGGCGTAT GGCACTGGTA TGTATGGCAA TTTTCCCTGC GGTACTGGTC
GTGATGGTGA TCTATCAGCG CTACAGTACG CCGATTGTGC GCCAGGTCCG CAGTTATCTC
GCTGATATTA ATGATGGTTT TAATGAGGCC ATTAATGGCA TGAGCGTGAT TCAGCAGTTC
CGCCAACAGG GGAAGTTCGG CCGTGTGTTG AGTCAGGCCA GTTGGTCGCA CTACGAGGCG
CGAATGCAGA CGCTGCGTCT GGATGGTTTT CTGCTCCGTC CGTTGCTTAG CTTGTTTTCC
GCCATGGTAC TTTGTGGGCT ATTGATGTTG TTCGGTTTTA GCCCTGTCGG TACCGTCGGT
GTGGGCGTGT TGTATGCGTT TATCAACTAC CTTGGCCGTT TGAATGAGCC GCTTATCGAA
CTGACGACGC AACAGTCGAT CCTGCAACAG GCGGTAGTCG CCGGCGAGCG GATCTTTGAG
CTGATGGATG GTGAGCGTCA GCAGTACGGC GAAGACGCCA GGGCGCTGGC TAGCGGGCGC
ATCGGTATTA ACGATGTCAC GTTCTCCTAC CGCGCCGGTA AACCTGTGCT GAGTCATATT
TGCTTGCAGG TGCCTGATCG CGGTTTCATT GCATTGGTCG GCCATACCGG CAGCGGCAAG
AGTACGTTGG CAAATTTGCT GATGGGGTAT TACGTGCCGG ACTGTGGTGA TATCCAGCTT
GACGGTCGGC CGTTGTCTTC GCTTTCCCAT CAGGTTCTGC GTCAGGATGT GGCGATGGTT
CAACAGGATC CCGTCGTTCT GGCCGATTCG ATGTATGCCA ATGTGACATT GGGGCGCGAT
ATCAGTGAAG ACGGTGTCTG GCACGCATTG GAAGCGGTGC AGTTGGCCGA TTTGGTGAGA
GCGATGCCTG AGGGAATTCA CAGTCGTATT GGCGAACAAG GCAATAATCT GTCGGTTGGC
CAGAAGCAAT TGTTGGCGTT GGCCCGGGTT TTGGTGCAAA CGCCGAGGAT TCTGATTCTG
GATGAGGCGA CTGCGAATAT TGATTCCGGT ACTGAACAGG CTATCCAACG TGCTCTGCGC
CTGGTGCGTG ACCATACTAC GTTGGTGGTG ATCGCGCATC GTCTTTCCAC TATCGTCGAG
GCCGACAGCA TTCTGGTGCT GCATCATGGC CGAACGGTAG AGCACGGCTC ACATGAACAA
CTGCTGGCTC AGCAAGGCCG CTATTACCAG ATGTATCAGC TGCAGCAGGC CGGACAACAG
TTAGTGAGCG CAGATCTCTG TCGTACAGCA GGCATGGTGC CCTGA
|
|---|
| Protein sequence | MTSSRSLWPT LKRLLAYGIP WRKSLGGGVL LLWLAAAAEV SGPALVSYFI DHVIARGEFP
VQLALGLAVG YVALQALAAL LHYVQALMFN RVAVGVVQQL RTDVMDAALR QPLGVFDTQP
VGQLISRVTN DTEVVRDLYV MVVGSVLRST ALIGAMLIAM FSLDWRMALV CMAIFPAVLV
VMVIYQRYST PIVRQVRSYL ADINDGFNEA INGMSVIQQF RQQGKFGRVL SQASWSHYEA
RMQTLRLDGF LLRPLLSLFS AMVLCGLLML FGFSPVGTVG VGVLYAFINY LGRLNEPLIE
LTTQQSILQQ AVVAGERIFE LMDGERQQYG EDARALASGR IGINDVTFSY RAGKPVLSHI
CLQVPDRGFI ALVGHTGSGK STLANLLMGY YVPDCGDIQL DGRPLSSLSH QVLRQDVAMV
QQDPVVLADS MYANVTLGRD ISEDGVWHAL EAVQLADLVR AMPEGIHSRI GEQGNNLSVG
QKQLLALARV LVQTPRILIL DEATANIDSG TEQAIQRALR LVRDHTTLVV IAHRLSTIVE
ADSILVLHHG RTVEHGSHEQ LLAQQGRYYQ MYQLQQAGQQ LVSADLCRTA GMVP
|
|---|
| |