Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_2859 |
Symbol | rimM |
ID | 8089692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 3337386 |
End bp | 3337934 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644836941 |
Product | 16S rRNA-processing protein RimM |
Protein accession | YP_002988456 |
Protein GI | 242240275 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCAAGC AACTTGGTCC GCAGTTTCCT GTTAACCCAA TTGTTCTTGG GAAAATAGGG TCAACATACG GTATTAGAGG TTGGCTCAAG GTATTTTCAT CCACCGAAGA GGCCGATAGC ATTTTTGATT ACCAACCCTG GTTTATCCAG AACAAGGGGC AGTGGCAGCA GGTAGAAATC GAAAGCTGGC GCTACCACAA CCAAAGCTTG ATCATCAAGA TTAAACATGT TGACGATCGG GATGCGGCGA ATCTGCTGAC CAATTGCGAA ATTGTTGTAG ATTCAACGCA GTTACCTGAG CTGGATGATG GGGAGTTTTA CTGGAAGGAT CTTATCGGCT GTGATGTCGT GACCGTTAGC GGTTATGAAC TGGGAAAAGT CATCGATATG ATGGAAACCG GTTCGAACGA TGTTCTGGTT GTAAGAGCCA ACCTGAAAGA TGCTTATGGC GTGAAGGAGC GGTTGATTCC GTTTCTGAAC GAACAGGTTA TCAAGCATAT CGACCTTTCT GCTCGTCGTA TCGAAGTGGA TTGGGATCCT GGTTTTTGA
|
Protein sequence | MSKQLGPQFP VNPIVLGKIG STYGIRGWLK VFSSTEEADS IFDYQPWFIQ NKGQWQQVEI ESWRYHNQSL IIKIKHVDDR DAANLLTNCE IVVDSTQLPE LDDGEFYWKD LIGCDVVTVS GYELGKVIDM METGSNDVLV VRANLKDAYG VKERLIPFLN EQVIKHIDLS ARRIEVDWDP GF
|
| |