Gene Dd703_2859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2859 
SymbolrimM 
ID8089692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3337386 
End bp3337934 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content46% 
IMG OID644836941 
Product16S rRNA-processing protein RimM 
Protein accessionYP_002988456 
Protein GI242240275 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0806] RimM protein, required for 16S rRNA processing 
TIGRFAM ID[TIGR02273] 16S rRNA processing protein RimM 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAGC AACTTGGTCC GCAGTTTCCT GTTAACCCAA TTGTTCTTGG GAAAATAGGG 
TCAACATACG GTATTAGAGG TTGGCTCAAG GTATTTTCAT CCACCGAAGA GGCCGATAGC
ATTTTTGATT ACCAACCCTG GTTTATCCAG AACAAGGGGC AGTGGCAGCA GGTAGAAATC
GAAAGCTGGC GCTACCACAA CCAAAGCTTG ATCATCAAGA TTAAACATGT TGACGATCGG
GATGCGGCGA ATCTGCTGAC CAATTGCGAA ATTGTTGTAG ATTCAACGCA GTTACCTGAG
CTGGATGATG GGGAGTTTTA CTGGAAGGAT CTTATCGGCT GTGATGTCGT GACCGTTAGC
GGTTATGAAC TGGGAAAAGT CATCGATATG ATGGAAACCG GTTCGAACGA TGTTCTGGTT
GTAAGAGCCA ACCTGAAAGA TGCTTATGGC GTGAAGGAGC GGTTGATTCC GTTTCTGAAC
GAACAGGTTA TCAAGCATAT CGACCTTTCT GCTCGTCGTA TCGAAGTGGA TTGGGATCCT
GGTTTTTGA
 
Protein sequence
MSKQLGPQFP VNPIVLGKIG STYGIRGWLK VFSSTEEADS IFDYQPWFIQ NKGQWQQVEI 
ESWRYHNQSL IIKIKHVDDR DAANLLTNCE IVVDSTQLPE LDDGEFYWKD LIGCDVVTVS
GYELGKVIDM METGSNDVLV VRANLKDAYG VKERLIPFLN EQVIKHIDLS ARRIEVDWDP
GF