Gene Dd703_2838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2838 
Symbol 
ID8089666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3312231 
End bp3312965 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content49% 
IMG OID644836917 
ProductDNA polymerase III subunit epsilon 
Protein accessionYP_002988437 
Protein GI242240256 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACTG TAATTACGAG ACAAGTCGTC CTTGATACCG AAACCACCGG CATGAACCGG 
CTGGGGGTTC ATTATGAAGG CCACCGTATT ATTGAAATTG GTGCGGTGGA AGTCATCAAC
CGTCGGTTAA CGGGACGCCA CTACCATGTA TATCTTAAGC CGGATCGGCT GGTAGATCCT
GAGGCGTTTC AGATTCATGG CATCAGTGAC GAGTTTTTGA TTGATCGGCC AGCCTATGCC
GATATTGTCG ATGAATTTAT TGAGTTTATC CGTGGTGCGG AACTGGTCAT CCATAATGCA
TCGTTTGATA TCGGTTTTAT GGATTACGAA TTCCGTATGT TGAATCGGGA TATCCCGAAG
ACCGAAACAT TTTGCAAGAT TACGGATAGC TTGGCGATGG CGCGCCGGTT GTTCCCCGGA
AAACGTAATA ACCTGGATGT GTTGTGTACA CGCTATCAGA TAGACAATAG CAAGCGAACT
CTGCATGGAG CATTGCTTGA CGCTGAAATT CTGGCGGAAG TTTATCTGGC GATGACCGGC
GGTCAAACGT CTCTGGCATT TTCCAGCGAC AGCGAAGGAA CACAACAGGC GGTGGTGGCG
GAAGCGATAC AGCGTATTGC CCGCCCAGCC TCGGCGTTGA AGGTCATTCA TGCCAATGAT
GATGAATTGA TGGCGCATGA GCAGCGTCTC GATCTGGTGA TGAAGAAAGG CGGCAGTTGT
TTGTGGCGGA ATTGA
 
Protein sequence
MSTVITRQVV LDTETTGMNR LGVHYEGHRI IEIGAVEVIN RRLTGRHYHV YLKPDRLVDP 
EAFQIHGISD EFLIDRPAYA DIVDEFIEFI RGAELVIHNA SFDIGFMDYE FRMLNRDIPK
TETFCKITDS LAMARRLFPG KRNNLDVLCT RYQIDNSKRT LHGALLDAEI LAEVYLAMTG
GQTSLAFSSD SEGTQQAVVA EAIQRIARPA SALKVIHAND DELMAHEQRL DLVMKKGGSC
LWRN