| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2816 |
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| Symbol | |
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| ID | 8089643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | - |
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| Start bp | 3292517 |
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| End bp | 3294955 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644836894 |
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| Product | ATP-dependent RNA helicase HrpB |
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| Protein accession | YP_002988415 |
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| Protein GI | 242240234 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATTTAC CCCCCGTCAG TGCGGTGCTG GATGACGTCG TTCAATCGCT GCGTTCTGCG
CCGCAGGTAC TGCTGCACGC GCCGACCGGC GCAGGAAAAT CGACCTGGTT GCCGCTGCAA
CTGCTGCTGA AGGGCGGTTT TCCCGGTCGT ATCGTGATGC TGGAGCCGCG GCGGCTGGCG
GCGAAAAGCG TGGCTTGGCG GCTGGCGGAG CAACTGGGGG AAGCGCCCGG TCGCACCGTG
GGATATCGCA TGCGCGCGGA AAGCCGCATT AGCGAGCAGA CGCGCCTGGA GGTGGTAACG
GAAGGCATTC TGACGCGCAT GCTACAGCGG GATCCGGCGC TGGAGGGCGT ATCGCTGGTC
ATCCTGGATG AGTTTCATGA ACGCAGCCTA CAGGCGGATC TGGCGCTGGC GCTGTTGCTG
GATGTACAGG CAGGGTTACG TGACGATCTG CGTCTGCTGA TTATGTCCGC CACGTTGGAT
AACGATCGCC TCTCTTCTTT ATTACCGCAG GCGCGAGCGG TGACATCAGC GGGCCGTTCC
TGGCCGGTGA CTCGGCAATA TCACGCAATG GGGTCGCAAG AGCGGCTGGA GGACGCGCTG
TCACGGTTGA TTTTACGGCT GTTGCAGCAG GAAACCGGAT CGCAACTGGT GTTTCTGCCC
GGCGTCGGGG AGATAAAGCG CCTGCAGGCT CTGTTGGAAG AAAACGTGCC GGAGGAGATT
GCGATCTGCC CGTTGTACGG CGCACTTACG CTGGCTGAGC AGCAAAAGGC GATCCTGCCG
GCAGAGCCCG GCCGGCGCAA AGTCGTGCTG GCGACCAATA TCGCTGAAAC CAGTCTGACG
ATTGAAGGGA TCCGGGTGGT TGTGGATAGC GGTCTGGAGC GCGTGGCGCT GTTTGACGTT
AAAACCGGGC TGACCCGGTT GGTCACACAG CGTATCAGTC AGGCCTCCAT GACGCAGCGC
GCCGGCCGTG CCGGTCGCCT GGAGCCCGGC GTGTGCTGGC ATCTGTTTGC CCGGGAGCAG
GCGGAGCGAG CGGCGGCGCA AAGCGAACCT GAAATCCTGC ACAGCGATCT GTCCGGTTTC
TGGCTGGAGT TGCTGCAATG GGGATGTGCG GACGTCGGGC AATTGACCTG GTTGGATACT
CCGCCGACGC CTGCCTTGCT GGCGGCGCAG CAGTTGTTGC GAGTGCTGGC GATTTGCGAT
CCCGGGCAGC GCTTGACACC GGATGGCAGG CAAATGGCGG CGCTGGGGTG CGATCCCCGT
CTGGCGGCGA TGTTGCACTA TGCCGGCGAC AATGACGATG CGCTGGCGAC GGCCGCGTTG
CTGGCTGCGA TAATCGAGGA GCCGCCCCGC AGCGGCTCGC CGTCGCTGTC CGACTGGCTG
CACCGCCCGA TGGCGCACTG GCAGAAACGG GCGCAGCAGC TGGCGCGGCG CGTCGGACAT
CGTCAAGGGC GATGTAATGA AGCGTTGGCG GCGGAACTGC TGGCCGTCGG TTTTCCCGAT
CGGGTGGCGC AACAGCGTTC CCGGGACGGT CGTTACCTGC TGGCTAACGG CACGGGCGCC
AGCCTGCCGC CGGAGGAGGC GTTATCCGCC GCCGAATGGT TGATTGCGCC GGCGTTGATG
CAGAGCCCGA ACAGCGCCGA TGCGCGGATT CAACTGGCGT TGGCGGTGGA TATCGAGCGG
CTGACGCAAC ATCATCCGGC GTTGGTGACA CAGCAGAATC AGGTGCACTG GGATGCAGAA
AAAGGTACCC TGCGCGCCAG CCGACGCACC CGACTCGGCG AATTAACGTT GCGCGTTCAG
CCGCTGGCTA AACCTTCCGA TGAGGAATGG CAACAGGCCA TGCTGGGATG GATTCGTGAA
CAGGGACTGA GCGTGTTGAA CTGGAGCGAT AGCGCGACGC AACTGCGCCA GCGACTGCTC
TGCGCCAGGC TCTGGTTGCC GGAGGTGGCC TGGCCGTTGG CGGATGATGA CGCGCTGTTG
GCGTCGCTGG ATACCTGGTT GTCGCCGTCG TTGTCCGGTG TGCGCGATCG CCGGGCGCTG
GAGCAGGTCG ATCTGACCGA CGCGCTATTG CGTCTGCTGG ACTGGCCGTT GCGGCAACGC
CTGGATAGCG CTTTACCCAG CCATTACACT GTGCCGGGCG GCAGTCGTTT GCCGATTCGT
TATCAGTGGG AACAGCCGCC GGTGCTGGCG GTGCGTCTGC AGGAAATGTT CGGTGAGCGG
CAAAGCCCAT CGGTGGCGGA AGGGCGCGTG GTGCTGGTGC TGGAATTGTT ATCGCCTGCG
CAGCGGCCAT TGCAGATTAC CCGCGATCTG GCTGCGTTCT GGCAGGGCGC CTATCGTGAA
GTACAAAAAG AGATGAAAGG GCGTTACCCG AAGCACGTCT GGCCGGATGA TCCGGCGAAC
GCCATACCGA CCAGACGAAC CAAAAAGTAT CAGCAATAG
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| Protein sequence | MNLPPVSAVL DDVVQSLRSA PQVLLHAPTG AGKSTWLPLQ LLLKGGFPGR IVMLEPRRLA
AKSVAWRLAE QLGEAPGRTV GYRMRAESRI SEQTRLEVVT EGILTRMLQR DPALEGVSLV
ILDEFHERSL QADLALALLL DVQAGLRDDL RLLIMSATLD NDRLSSLLPQ ARAVTSAGRS
WPVTRQYHAM GSQERLEDAL SRLILRLLQQ ETGSQLVFLP GVGEIKRLQA LLEENVPEEI
AICPLYGALT LAEQQKAILP AEPGRRKVVL ATNIAETSLT IEGIRVVVDS GLERVALFDV
KTGLTRLVTQ RISQASMTQR AGRAGRLEPG VCWHLFAREQ AERAAAQSEP EILHSDLSGF
WLELLQWGCA DVGQLTWLDT PPTPALLAAQ QLLRVLAICD PGQRLTPDGR QMAALGCDPR
LAAMLHYAGD NDDALATAAL LAAIIEEPPR SGSPSLSDWL HRPMAHWQKR AQQLARRVGH
RQGRCNEALA AELLAVGFPD RVAQQRSRDG RYLLANGTGA SLPPEEALSA AEWLIAPALM
QSPNSADARI QLALAVDIER LTQHHPALVT QQNQVHWDAE KGTLRASRRT RLGELTLRVQ
PLAKPSDEEW QQAMLGWIRE QGLSVLNWSD SATQLRQRLL CARLWLPEVA WPLADDDALL
ASLDTWLSPS LSGVRDRRAL EQVDLTDALL RLLDWPLRQR LDSALPSHYT VPGGSRLPIR
YQWEQPPVLA VRLQEMFGER QSPSVAEGRV VLVLELLSPA QRPLQITRDL AAFWQGAYRE
VQKEMKGRYP KHVWPDDPAN AIPTRRTKKY QQ
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