Gene Dd703_2812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2812 
Symbol 
ID8089639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3285643 
End bp3287661 
Gene Length2019 bp 
Protein Length672 aa 
Translation table11 
GC content64% 
IMG OID644836890 
Productiron-hydroxamate transporter permease subunit 
Protein accessionYP_002988411 
Protein GI242240230 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATGG CCAATACGGT CAATACCGTT TCTCCGGCGA AGCCCTCACC CTTGCTCGTT 
ACCGTGTTGC TGGGGCTGCT GCTGCCGTCG ATCGTTCTTT GCGGCTATAA CCTGGGGCGG
CAATTGCCGT TCTCGCTGTG GTTTGAGGGG CTGTTTGCGC CCGCCGACGA CGATATTCGT
CAGGTCTTAT TCCATTACAG CCTGCTGCCG CGGCTGGCGC TGTCGTTATT GGTCGGCGCC
GGGCTGGGGC TGGTGGGGGT GCTGTTTCAG CAGGTATTGC GTAATCCGCT GGCGGAACCT
TCCACGCTGG GGGTGTCGAC CGGTGCGCAA TTGGGCTTGA CGGTCGCCAC CTTGTGGGCG
TTGCCCGGCG GCGAGCTGAC GGCGCAGTTG GCGGCGATGA CCGGAGCCTT GCTGGTGGGC
GGGCTGGTGT TCGGCGTGGC CTGGGGGCGG CGGCTGTCGC CGGTCACGCT GATTCTGGCG
GGGTTGGTGC TCAGTCTGTA TTGCAGCGCG GTGAGCCAGT TGCTGGCGCT GTTTCATTAT
GAGCAATTGA CCAATCTGTT CCTGTGGAGC AGCGGCGCAT TAAATCAGCA GGACTGGCAG
GTGGTGAATC GGGTCTGGCC GATGTTGCTT GGCGGTTTGC TGATGGCGTC GCTGCTGGCT
CGGCCGCTGA CGTTGTTGGG CCTGGATGAT GATGTGGCCC GCAATCTGGG GCTGGCGCTG
GCGTTAATGC GCGCCGGCAC GCTGCTGTTG GCCATTTTCC TGAGTGCGCA GTGGGTGAAC
GCGGCAGGTA TTATCGGTTT TATCGGCCTG TTCGCTCCGC TGATGGCGAA AATGTTGGGG
GCCAGACGCC TCAGCCAGCG GCTGTGGCTG GCCCCGTCGC TGGGCGCATT GCTGCTGTGT
CTGACGGATC AACTGTTGCA ATGGCTGGCG ACGGTATGGC TCGATGTGCC GACCGGCGCG
GCGACGGCGC TGCTGGGAGC GCCGTTGTTG TTATGGCTGT TGCCGCGTTT ACGCACGTCC
GTACCCTCGG CGGTGGCGGA AGGCCCTGTT GTGTTGCGGG AACGCGCTCA CTGGGGATGG
TGGTGGCTGG CCGGCTTGGG GTTGACCGGG CTGGCGGTAG TGGCGGCGCT GTGTCTGGGG
CGTGACGTCG GCGGTTGGTC TTGGGCGACG GGCGATGCGT TATCGTCGCT GTTGCCCTGG
CGCTGGCCGC GGCTGCTGGC GGCATTGAGC GCCGGCGTGA TGTTGGCGGT GGCGGGCGCG
CTGATCCAGC GCCTGACGGG AAACCCGATG GGCAGCCCGG AGGTACTTGG GGTTAGCGCC
GGTGCCGCGC TGGGCGTCGT CGTGCTGCTG TTTCTGATGC CGGGCGATGC GCTGACCTGG
ATGCTGCCCG CCGGTAGTGC GGGGGCGTTG GGCACGTTGC TGATGATTAT GCTGACGGCG
GGGTGGGGCG GCGTCTTTTC CTCGCAGCGC ATGTTATTGG TGGGGATCGC CATCGGTACG
GCGTTTACCA CGTTGATCAG TCTGGTACTG GCGAGCGGCG ATCCGCGTTC CGGTATGCTG
TTGACCTGGC TTTCCGGTTC TACGTATCGG GTTACGCCTG TTCAGGCGTT GGTATCGGCG
CTGGCTGCAT CGTCGCTCGT GGTGGTTGTG CCGTTATGTC AACGCTGGTT GCAACTGCTG
CCGCTGGGGA CGATGACGGT ACGTTCGCTC GGTATGGCGG CGACGCCGGT ACGACTGGCG
ATACTGGCGC TGGCGTCGGT GCTGACGGCG GTCGCGACCA TGGTTGTCGG CCCGATGAGT
TTTGTCGGCC TGATGGCGCC GCATCTGGCG CGCATGCTGG GTTTTAACCG CGTGGTACCG
CAGATGGCGT TTGCCGCGCT GCTGGGCGGC GGGTTGATGA CGCTGGCGGA CTGGTGTGGC
CGCACGCTGT TGTTTCCGAA CCAGATCCCG GCCGGGTTGC TAGCGACGTT TATCGGCGCG
CCTTATTTTA TCTGGCTGCT GCGCCGTCAG GCCCGGTAA
 
Protein sequence
MTMANTVNTV SPAKPSPLLV TVLLGLLLPS IVLCGYNLGR QLPFSLWFEG LFAPADDDIR 
QVLFHYSLLP RLALSLLVGA GLGLVGVLFQ QVLRNPLAEP STLGVSTGAQ LGLTVATLWA
LPGGELTAQL AAMTGALLVG GLVFGVAWGR RLSPVTLILA GLVLSLYCSA VSQLLALFHY
EQLTNLFLWS SGALNQQDWQ VVNRVWPMLL GGLLMASLLA RPLTLLGLDD DVARNLGLAL
ALMRAGTLLL AIFLSAQWVN AAGIIGFIGL FAPLMAKMLG ARRLSQRLWL APSLGALLLC
LTDQLLQWLA TVWLDVPTGA ATALLGAPLL LWLLPRLRTS VPSAVAEGPV VLRERAHWGW
WWLAGLGLTG LAVVAALCLG RDVGGWSWAT GDALSSLLPW RWPRLLAALS AGVMLAVAGA
LIQRLTGNPM GSPEVLGVSA GAALGVVVLL FLMPGDALTW MLPAGSAGAL GTLLMIMLTA
GWGGVFSSQR MLLVGIAIGT AFTTLISLVL ASGDPRSGML LTWLSGSTYR VTPVQALVSA
LAASSLVVVV PLCQRWLQLL PLGTMTVRSL GMAATPVRLA ILALASVLTA VATMVVGPMS
FVGLMAPHLA RMLGFNRVVP QMAFAALLGG GLMTLADWCG RTLLFPNQIP AGLLATFIGA
PYFIWLLRRQ AR