Gene Dd703_2804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2804 
Symbol 
ID8089631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3275637 
End bp3276794 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content56% 
IMG OID644836882 
Productcarbohydrate diacid transcriptional activator CdaR 
Protein accessionYP_002988403 
Protein GI242240222 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3835] Sugar diacid utilization regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTCCT ACCATCTAAA TGCCAAACTG GCGCAGGATA TCGTTGCGCG AACCATGCAG 
ATTATTGATA GCAATATCAA TGTGATGGAT GCAAGAGGGC GCATCATCGG CAGCGGTGAC
AGAGAGCGTA TTGGGGAATT GCATGAAGGG GCGTTATTGG CATTGTCGCA AGGCCGCGTG
GTGGATATTG ACGAAGCGGT AGCCCGCCAC CTGCAAGGGG TACGGCCCGG CGTCAACCTG
CCGTTGCGCA TTGATGGCGA GATTGTCGGG GTCATCGGCT TGACCGGTAA TCCCGGTCAA
TTGCGTCAGT ATGGCGAACT GGTATGTATG ACTGCGGAGA TGATGCTGGA GCAGGCCAGA
TTGCTGCATA TGCTGGCACA GGACAGCCGC CTGCGCGAGG AACTGGTGCT GAACCTGATT
CGTACTGATG AATTGTCCCC GGCGCTGATG GAATGGGCGC AGCGGCTGGG CATTGATCTG
AATCAGCCGC GCGTGGTCGC GGTGGTGGAA GTGGACAGCG GGCAACTGGG CGTAGATAGC
GCCATGGCGG AATTGCAGCA ACTGCAGACG TTGTTGACGA CACCGGAACG GAACAATCTG
ATCGCCATTG TATCGTTGAC GGAAATGGTG GTGCTGAAGC CCGCGTTGAC CAGCCACGGT
CGCTGGGATG CGGAAGACCA TCGTCGTCGC GTGGATACGC TGCTCTCGCG CATGGAAGAG
AGTAGCCGTT TGCGCGTCAG AGTGGCGTTG GGGAACTATT TCTCCGGTTC GGGCAGTATC
GCCCGTTCTT ATCGTACCGC ACGTACTACC ATGAGCGTCG GTAAGCAACG AATGCCGGCG
CAACGTAGTT ATTTTTATCA GGATTTGATG TTGCCCGTAC TGCTCGACAG CCTGCGCGGC
GGCTGGCAGG CCAACGAGTT GGTGCGCCCG CTGGCGCGTT TGAAGGCGAT GGACAGTAAT
GGTTTGCTGC GTCGGACGCT GAATGCCTGG TTTCGGCAGA ATGTTCAGCC GGGGGCTACA
GCCAAAGCAT TGTTTATTCA CCGTAATACA TTGGAGTATC GTCTTAATCG CATTTCGGAA
CTAACGGGTC TGGATTTGAG CAGTTTTGAT GATCGTCTGT TGCTGTATAT CGCGCTGCAA
TTGGATGAAG ACCAGTAA
 
Protein sequence
MASYHLNAKL AQDIVARTMQ IIDSNINVMD ARGRIIGSGD RERIGELHEG ALLALSQGRV 
VDIDEAVARH LQGVRPGVNL PLRIDGEIVG VIGLTGNPGQ LRQYGELVCM TAEMMLEQAR
LLHMLAQDSR LREELVLNLI RTDELSPALM EWAQRLGIDL NQPRVVAVVE VDSGQLGVDS
AMAELQQLQT LLTTPERNNL IAIVSLTEMV VLKPALTSHG RWDAEDHRRR VDTLLSRMEE
SSRLRVRVAL GNYFSGSGSI ARSYRTARTT MSVGKQRMPA QRSYFYQDLM LPVLLDSLRG
GWQANELVRP LARLKAMDSN GLLRRTLNAW FRQNVQPGAT AKALFIHRNT LEYRLNRISE
LTGLDLSSFD DRLLLYIALQ LDEDQ