| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2782 |
|---|
| Symbol | |
|---|
| ID | 8089603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 3251549 |
|---|
| End bp | 3252280 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644836854 |
|---|
| Product | pyridoxal phosphate biosynthetic protein PdxJ |
|---|
| Protein accession | YP_002988381 |
|---|
| Protein GI | 242240200 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0854] Pyridoxal phosphate biosynthesis protein |
|---|
| TIGRFAM ID | [TIGR00559] pyridoxine 5'-phosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAGT TGTTGTTGGG CGTAAATATC GATCACGTCG CCACCTTGCG TAATGCGCGT
GGTACTGCGT ATCCAGATCC GGTGCAGGCG GCATTTATCG CCGAGCAGGC GGGAGCAGAC
GGGATCACTG TGCATTTGCG GGAAGATCGG CGTCATATCA CCGATAGGGA TGTCAGGTTG
TTGCGTCAAA CTATCCAGAC CCGGATGAAC CTGGAAATGG CAGTGACTGA TGAAATGCTG
GCTATTGCCT GCGAACTGAA ACCGCATTTT TGTTGCCTGG TCCCGGAAAA ACGCCAGGAA
GTCACAACGG AAGGCGGCCT GGACGTTGCC GGACAGTTGG AAAGAATGAA GATCTCAGTA
GCCAGATTGC GCGATGCCGG GATTCAGGTT TCCCTGTTTA TTGATGCGAA TCATGCGCAG
ATAGACGCTG CCGCCGCCTG TGGCGCACCC TATATTGAAA TCCACACTGG CGCCTATGCC
GATGCGGTTG ATGAACACAC CCGCCAGCTG GAATTTGCCC GCATTCGTGA GGCGGCCTCT
TATGCCGCTG GCCTGGGGAT TAACGTTAAT GCCGGGCACG GATTGACCTA TCACAATGTA
CAACCCATTG CAGCACTGCC TGAGATGCAT GAGTTGAACA TCGGTCACGC CATTATTGGT
AGAGCAGTGA TGAGTGGTCT CGCCGACGCA GTCGCAGACA TGAAGTCCCT GATGCGGGAA
GCCCGTCGTT AA
|
|---|
| Protein sequence | MSELLLGVNI DHVATLRNAR GTAYPDPVQA AFIAEQAGAD GITVHLREDR RHITDRDVRL
LRQTIQTRMN LEMAVTDEML AIACELKPHF CCLVPEKRQE VTTEGGLDVA GQLERMKISV
ARLRDAGIQV SLFIDANHAQ IDAAAACGAP YIEIHTGAYA DAVDEHTRQL EFARIREAAS
YAAGLGINVN AGHGLTYHNV QPIAALPEMH ELNIGHAIIG RAVMSGLADA VADMKSLMRE
ARR
|
|---|
| |