Gene Dd703_2645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2645 
Symbol 
ID8088331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3097279 
End bp3098241 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content58% 
IMG OID644836716 
ProductSubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_002988244 
Protein GI242240063 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.202001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCAG CATTACGCCA TGCCGGTTGG AAACTTTCCC TGATTGCCGT CTGTCTATCT 
GCCGCCCCGT GGGTTCATGC CGAAGAGACG CCGGTGGCGA TCGGCATTTC TGGATGGATC
GGCTTTGCCC CGCTGACGCT GGCGGATAAG GCGGGTATTT TTCAGAAACA CGGCCTGAAG
GTGGATTTGA AAATGATCCC GCAGAAAGAC CGGCATCTGG CGGTGGCGTC CGGCGCCATC
CAGTGCGCCG CTACCACGGT GGAGACCTAT GTATCCTGGG CCGCGGCTGG CGTGAGGCTC
AAACAGATCG TCCAGCTGGA TAAATCCTAC GGCGCGGACG GCCTGGCGGT ACGCAACGAT
GTTAAAAGTG TGCGCGACCT GAAGGGGAAA ACCATCGGTG TGGACGCGCC GGGTACCTCG
CCTTATTTCG CGCTGGCGTG GATTTTGGAT AAAAACGGCA TGAGCATCAA AGATGTGAAA
GTCGCCACCT TGTCGCCGCA GGCTTCGGCG CAGGCGTTCG TCGCCGGTCA GAACGACGCG
GCGATGAGCT ACGAACCCTA CCTGTCCACC ATTCGTCAAC AGCCGGACAA AGGTAAAATT
ATCGCCACCA CGCTGGACTA TCCGATGGTG ATGGACACCT TGGGTTGCAC GCCTGACTTC
CTGAAACAAC ACCCGCAGGT GGGAAAAGCG TTGGTGGAAA GCTATTTCGA TGCGCTGGAT
ATGATCAAAT CCCAGCCGGA CAAATCCTAC GACATCATGG GCGCGGCGGT GAAATCGAGC
GGCAAGGCGT TCGCCCAGTC GGCCCAGTAT TTGCGTTGGC AGGATCGCGA GCAGAACCGC
GTGTTCTTCA GCGGCGAGAT CGCCAAATTC AGCGAAGAAG CCGCCAAGCT GTTGCTGGAG
GCCAAAGTGA TTCGCCAGAA ACCGGATCTT TCGGCGCTGT ATGACGCCAG CTATGTGAAA
TAA
 
Protein sequence
MSAALRHAGW KLSLIAVCLS AAPWVHAEET PVAIGISGWI GFAPLTLADK AGIFQKHGLK 
VDLKMIPQKD RHLAVASGAI QCAATTVETY VSWAAAGVRL KQIVQLDKSY GADGLAVRND
VKSVRDLKGK TIGVDAPGTS PYFALAWILD KNGMSIKDVK VATLSPQASA QAFVAGQNDA
AMSYEPYLST IRQQPDKGKI IATTLDYPMV MDTLGCTPDF LKQHPQVGKA LVESYFDALD
MIKSQPDKSY DIMGAAVKSS GKAFAQSAQY LRWQDREQNR VFFSGEIAKF SEEAAKLLLE
AKVIRQKPDL SALYDASYVK