Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_2645 |
Symbol | |
ID | 8088331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 3097279 |
End bp | 3098241 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644836716 |
Product | Substrate-binding region of ABC-type glycine betaine transport system |
Protein accession | YP_002988244 |
Protein GI | 242240063 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.202001 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTGCAG CATTACGCCA TGCCGGTTGG AAACTTTCCC TGATTGCCGT CTGTCTATCT GCCGCCCCGT GGGTTCATGC CGAAGAGACG CCGGTGGCGA TCGGCATTTC TGGATGGATC GGCTTTGCCC CGCTGACGCT GGCGGATAAG GCGGGTATTT TTCAGAAACA CGGCCTGAAG GTGGATTTGA AAATGATCCC GCAGAAAGAC CGGCATCTGG CGGTGGCGTC CGGCGCCATC CAGTGCGCCG CTACCACGGT GGAGACCTAT GTATCCTGGG CCGCGGCTGG CGTGAGGCTC AAACAGATCG TCCAGCTGGA TAAATCCTAC GGCGCGGACG GCCTGGCGGT ACGCAACGAT GTTAAAAGTG TGCGCGACCT GAAGGGGAAA ACCATCGGTG TGGACGCGCC GGGTACCTCG CCTTATTTCG CGCTGGCGTG GATTTTGGAT AAAAACGGCA TGAGCATCAA AGATGTGAAA GTCGCCACCT TGTCGCCGCA GGCTTCGGCG CAGGCGTTCG TCGCCGGTCA GAACGACGCG GCGATGAGCT ACGAACCCTA CCTGTCCACC ATTCGTCAAC AGCCGGACAA AGGTAAAATT ATCGCCACCA CGCTGGACTA TCCGATGGTG ATGGACACCT TGGGTTGCAC GCCTGACTTC CTGAAACAAC ACCCGCAGGT GGGAAAAGCG TTGGTGGAAA GCTATTTCGA TGCGCTGGAT ATGATCAAAT CCCAGCCGGA CAAATCCTAC GACATCATGG GCGCGGCGGT GAAATCGAGC GGCAAGGCGT TCGCCCAGTC GGCCCAGTAT TTGCGTTGGC AGGATCGCGA GCAGAACCGC GTGTTCTTCA GCGGCGAGAT CGCCAAATTC AGCGAAGAAG CCGCCAAGCT GTTGCTGGAG GCCAAAGTGA TTCGCCAGAA ACCGGATCTT TCGGCGCTGT ATGACGCCAG CTATGTGAAA TAA
|
Protein sequence | MSAALRHAGW KLSLIAVCLS AAPWVHAEET PVAIGISGWI GFAPLTLADK AGIFQKHGLK VDLKMIPQKD RHLAVASGAI QCAATTVETY VSWAAAGVRL KQIVQLDKSY GADGLAVRND VKSVRDLKGK TIGVDAPGTS PYFALAWILD KNGMSIKDVK VATLSPQASA QAFVAGQNDA AMSYEPYLST IRQQPDKGKI IATTLDYPMV MDTLGCTPDF LKQHPQVGKA LVESYFDALD MIKSQPDKSY DIMGAAVKSS GKAFAQSAQY LRWQDREQNR VFFSGEIAKF SEEAAKLLLE AKVIRQKPDL SALYDASYVK
|
| |