| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2635 |
|---|
| Symbol | |
|---|
| ID | 8088321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 3085077 |
|---|
| End bp | 3086291 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644836706 |
|---|
| Product | Mandelate racemase/muconate lactonizing protein |
|---|
| Protein accession | YP_002988234 |
|---|
| Protein GI | 242240053 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0759429 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAATTG TCAGTGCAGA GGTCTTTGTC ACCTGCCCAG GACGCAACTT CGTCACCCTG
AAAATCACTA CCGCCGACGG CATCAGCGGC ATTGGCGACG CCACCCTTAA CGGCCGCGAG
CTGTCTGTGG CGTCCTATCT GAAGGATCAT ATTTGTCCGC AGTTAATCGG GCGGGATGCC
CGGCAGATTG AGGATATCTG GCAATATTTC TACAAAGGCG CCTACTGGCG TCGCGGCCCG
GTCACGATGT CCGCCATCTC CGCCGTCGAC ATGGCGCTGT GGGATATCAA GGGCAAGATG
GCGAACATGC CGTTGTACCA ATTGCTGGGC GGCGCCTCCC GCGCCGGCGT GATGGTCTAT
TGCCACACCA CCGGCCACTC CATCGACGAC GTGCTGGACG ACTACGCCAG ACACCGCGAG
ATGGGGTTTA AAGCCATCCG CGTGCAGTGC GGCGTTCCCG GCATGAAAAC CACCTACGGC
ATGGCGAAGG GTAAAGGCTT GGCCTATGAA CCCGCCACCA AGGGCAACTG GCCGGAAGAA
CAGATTTGGT CGACGGAAAA ATACCTCGAC TTCGTACCCA ATTTGTTTGA AGCGGTACGC
AACAAATTCG GGTTCGATGA ACACCTGCTG CACGACATGC ACCACCGTCT GACGCCGATT
GAAGCGGCGC GCTTCGGCAA AAGCGTGGAA CCCTATCGGC TCTTCTGGAT GGAAGACCCG
ACGCCTGCGG AAAACCAAGA ATGCTTCCGC CTGATTCGTC AGCACACCGT GACCCCGATC
GCCGTCGGCG AAGTGTTCAA CAGCATTTGG GATTGCAAAC AACTGATTGA AGAACAGCTG
ATCGACTACA TTCGCACCAC CATCACCCAC GCCGGCGGCA TCACCGGTAT GCGGCGCATC
GCCGACTTCG CCTCGCTGTA TCAGGTACGT ACCGGGTCAC ACGGCCCATC CGACCTTTCA
CCCATCTGTA TGGCGGCGGC GTTGCATTTC GATCTTTGGG TACCCAATTT CGGCATTCAG
GAATACATGG GCTACTCGGA ACAGATGCTG GAAGTGTTCC CGCACAGCTG GACATTCGAC
GGCGGTTATA TGCACCCCGG CGATAAGCCC GGCCTCGGCA TCGAATTTGA TGAAAAACTG
GCGGCCAAAT ATCCCTTCGA ACCCGCCAAT CTGCCGATCG CCCGTCTCGA AGACGGTACG
TTGTGGAACT GGTAA
|
|---|
| Protein sequence | MKIVSAEVFV TCPGRNFVTL KITTADGISG IGDATLNGRE LSVASYLKDH ICPQLIGRDA
RQIEDIWQYF YKGAYWRRGP VTMSAISAVD MALWDIKGKM ANMPLYQLLG GASRAGVMVY
CHTTGHSIDD VLDDYARHRE MGFKAIRVQC GVPGMKTTYG MAKGKGLAYE PATKGNWPEE
QIWSTEKYLD FVPNLFEAVR NKFGFDEHLL HDMHHRLTPI EAARFGKSVE PYRLFWMEDP
TPAENQECFR LIRQHTVTPI AVGEVFNSIW DCKQLIEEQL IDYIRTTITH AGGITGMRRI
ADFASLYQVR TGSHGPSDLS PICMAAALHF DLWVPNFGIQ EYMGYSEQML EVFPHSWTFD
GGYMHPGDKP GLGIEFDEKL AAKYPFEPAN LPIARLEDGT LWNW
|
|---|
| |