| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2617 |
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| Symbol | |
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| ID | 8087008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 3064329 |
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| End bp | 3065936 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644836688 |
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| Product | transcriptional regulator, NifA subfamily, Fis Family |
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| Protein accession | YP_002988216 |
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| Protein GI | 242240035 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR01817] Nif-specific regulatory protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACGTG ATAAAAGACG CTTCACCGCC ATGACCCGCC CATCGCTGAT GGAACCGCTG
TCATTCAGTT GCCGTCTTGG CGAATGCCGC TCCGAATTGT TGCCATTGCT GTCGGAAGTG
AGCAAGGTGG TCAGCGCCGA AGGGTCGTTA TCGAAGACGC TCAAACTGGT GCTGGAGCTG
ATGCAAAAAC ATCTACAGGT GATCCGCGCC ATGATCACAC TGTATGACGC CAGTTGCGAT
CAAATCTTCA TCCACGAAAG CTACGGGCTC TCCCGGGAAG AAGCGGATAA AGGGGTTTAT
GCGCCCGGCG AAGGCATTAC CGGCCGGGTG ATCGAAACCC GGCAGCCGAT CATCGTGCCG
AATATCGCCG ACGATCCGCT GTTCCTCAAC CGCACCGGCA GTTGGAACCA ACACCGCGAC
GGCCAGTTGT CTTTTATTTG CGTACCCATC ATCCGCAGCC TGAAAGTCAT GGGCACCATC
GGTATCGAAC GGTTGTACCA CAACGAACAG CTGCGCTATC TGGACGTCGA AGTGCTGCGG
GTCATCGCCG CCATCATCGC GCAGGCGGTC GAGCTGCATC TGCTGGAAAG AGCGCATCAG
AAAATTCTGC TGGCGCAGGC CAGTTCACTG CGCCAGCAAC GGGAGAAATT CAAACCGGCC
AATATTATCG GCAACTCGCG CGCGATGCAG TCGGTCTACC AGTTAATCGA CAAAGTGAGC
CACGCCCGCA CCACAGTGCT GATCCTGGGG GAAAGCGGCG TCGGCAAAGA GCGCGTCGCC
ACCGCCCTCC ATCAGAACAG CCACTGCGCC AATGGCCCGT TCATCAAGTT CAACTGCGCC
TCGCTGCCGG AAAGCGTGAT TGAAAGCGAA CTGTTCGGCC ATGAGAAAGG CGCCTTCACC
GGGGCGATTT CACGCCGCGC CGGGCGTTTC GAAGAAGCGG ACGGCGGCAC CCTCTTTCTC
GACGAGGTGG GCGAACTGTC GCCGTCCGCC CAGTCCAAAC TGCTGCGCGT GTTGCAGGAA
CGCAGCTTCG AGCGGGTCGG CAGCAACGAG ACCATCCAGG TCAACGTGCG TATTTTGGCC
GCCACCCACC GCGATCTGAG CGACATGGTG GAAAAGAGGC TGTTTCGCGA AGACCTTTTC
TATCGGCTGA ACGTGTTCCC CATTACCATT CCGCCGCTGC GGGAGCGCGG TAACGACATT
CTGATTCTGG CCGACCACTT CAACGCCCAT TTCGCCACAG AACAGGGGGT GGATATCCCC
ACCATCGCCA CACCGGCCTT GAACCTGCTG TTGAGTTACG ACTGGCCGGG CAACGTGCGG
GAACTGGAAA ACGTGATGGA GCGGGCAGTG CTGTTGGCGG ATGAAGGCGT CATTCACAGC
TACCATTTGC CGATCAACCT ACAGCCCATC GTCGAACACA TCACTCAACA GGATGGCCTG
GAAGCCAGGC TGTCCCGCGT GGAGTACGAC CTGATCGTCG AGGCGCTCTC AACCTATCAG
GGCAACGTCT CCCGCACCGC CGCCCATCTG AACATGACGC GCCGGGCGTT GGGGCTGCGG
TTGGCGAAAT ACCGGCTTGA CTATAAAAAC TATCGGGGCC GGGCATAA
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| Protein sequence | MQRDKRRFTA MTRPSLMEPL SFSCRLGECR SELLPLLSEV SKVVSAEGSL SKTLKLVLEL
MQKHLQVIRA MITLYDASCD QIFIHESYGL SREEADKGVY APGEGITGRV IETRQPIIVP
NIADDPLFLN RTGSWNQHRD GQLSFICVPI IRSLKVMGTI GIERLYHNEQ LRYLDVEVLR
VIAAIIAQAV ELHLLERAHQ KILLAQASSL RQQREKFKPA NIIGNSRAMQ SVYQLIDKVS
HARTTVLILG ESGVGKERVA TALHQNSHCA NGPFIKFNCA SLPESVIESE LFGHEKGAFT
GAISRRAGRF EEADGGTLFL DEVGELSPSA QSKLLRVLQE RSFERVGSNE TIQVNVRILA
ATHRDLSDMV EKRLFREDLF YRLNVFPITI PPLRERGNDI LILADHFNAH FATEQGVDIP
TIATPALNLL LSYDWPGNVR ELENVMERAV LLADEGVIHS YHLPINLQPI VEHITQQDGL
EARLSRVEYD LIVEALSTYQ GNVSRTAAHL NMTRRALGLR LAKYRLDYKN YRGRA
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