| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2520 |
|---|
| Symbol | |
|---|
| ID | 8086910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 2959587 |
|---|
| End bp | 2961008 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644836590 |
|---|
| Product | transcriptional regulator, GntR family with aminotransferase domain |
|---|
| Protein accession | YP_002988119 |
|---|
| Protein GI | 242239938 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0126986 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTGAATAAGT TCGAACAGCT GGCGCACCAG ATGCGCGAGC AACTGCAGGC CGGTATCTGG
CAACCCGGCG AGAAGTTGCC GTCGCTGCGG GAGAAAGCGG TACACAGCGG GCTGAGCTTG
ATGACTGTGT TGCATGCCTA TCAGTGGCTG GAAAGCCAGG GGCTGATCGT TTCCCGGCCG
CAGTCCGGCT ATTATGCGGC GCCCCGTGTT CAGGCTCCGC CCGTGCCGTT GGATAAGGGC
AAGGCGGTGC AACTGACGGC GCAGGTCGAC GTCAATGCCT TTATTTTCGA CGTGTTGCAG
GCCAGCCGCG TCCCCGGCGT GGTGCCGTTC GGCTCCGCCT TCCCCGATCC TCGTCTGTTT
CCCCAGCGCC AGCTGACGCG CTCGTTGGCG ACGGTGGCGC GCCGCATGCA GCCGGACAAT
GCGGTAGATA ATCTTCCTCC AGGCAATGAA CGTCTGCGTA TGCAGGTAGC CCAACGCTAT
GCATTGCAGG GCATCTCGGT ATCGCCCGAT GAGATTGTCA TCACCAGCGG CGCGTTGGAG
TCGCTAAATC TCAGCCTACA GGCGCTAACG CGCCCCGGGG ATTATGTGGT GGTGGAGTCG
CCGACGTTTT ATGGCGCGTT GCAGGCTATC GAGCGTCTGA GGCTTAAAGC GATCGCCGTG
ACAGCTTCCC CACAGACAGG CCTTGATCTG GATGCGTTGC AACAGGCGCT GCGCGATTAT
CCGATTCGTG TCTGCTGGCT GATGAGTAAT TTTCATAACC CGTTGGGGTG CACATTATCC
TGGGAAAAAA AGCAGCGTTT GGCCGAGCTG CTGCAACAGT ACCAGGTGCC ACTGATTGAA
GACGATGTGT ACGGTGAACT GTATACCGGC ACTCATCGGC CGTTGCCCAT GAAAGCGCTT
GATCGGCAAG GGGACGTGTT GCATTGCTCT TCATTTTCGA AAAATCTGGT GGCCGGTTTT
CGGGTCGGCT GGGTAACGGC GGGGCGTTGG ACGGAACGTA TCCAGCGGCT GCAATTGATG
AGTACGCTGT CAGCCAGTGC ACCGATGCAG CTGGCGGTGG CGGATTATCT GGCGACCAGC
AGTTACGACA GCCACCTCAG GCGGTTACGC CGCACATTGG AGCAGCGAAA ATACCGAATT
TATCAGGCTA TGCGCACGCA TTTTCCCGCT GCCGTCGATA TCTATTACGC GGACGGCGGC
TATTTCCTGT GGCTGGCGCT GCCGGAGGGC GGCGACAGTA TGGCGTTGTA TCGGCAGGCG
CTGGCGCAGG GGATTACGTT GGCGCCAGGA AGAATGTTCA CCACCGGCGA TAAATTTGAA
CGCTACTTTC GCATCAATAC ATCCCTTGAG TGGAATGACC GCACCGAAAA GGCAGTATTG
ACGCTGGCGG AGCTGTTGCA TCAGCAACGG AGTGATCATT GA
|
|---|
| Protein sequence | MNKFEQLAHQ MREQLQAGIW QPGEKLPSLR EKAVHSGLSL MTVLHAYQWL ESQGLIVSRP
QSGYYAAPRV QAPPVPLDKG KAVQLTAQVD VNAFIFDVLQ ASRVPGVVPF GSAFPDPRLF
PQRQLTRSLA TVARRMQPDN AVDNLPPGNE RLRMQVAQRY ALQGISVSPD EIVITSGALE
SLNLSLQALT RPGDYVVVES PTFYGALQAI ERLRLKAIAV TASPQTGLDL DALQQALRDY
PIRVCWLMSN FHNPLGCTLS WEKKQRLAEL LQQYQVPLIE DDVYGELYTG THRPLPMKAL
DRQGDVLHCS SFSKNLVAGF RVGWVTAGRW TERIQRLQLM STLSASAPMQ LAVADYLATS
SYDSHLRRLR RTLEQRKYRI YQAMRTHFPA AVDIYYADGG YFLWLALPEG GDSMALYRQA
LAQGITLAPG RMFTTGDKFE RYFRINTSLE WNDRTEKAVL TLAELLHQQR SDH
|
|---|
| |