Gene Dd703_2330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2330 
Symbol 
ID8086717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp2744053 
End bp2745231 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content58% 
IMG OID644836404 
Productsugar efflux transporter 
Protein accessionYP_002987936 
Protein GI242239755 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00899] sugar efflux transporter 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.99673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCATTT CAGCCAGCAC AACTCGTCGT CTGCCAGATC TGACCGCGTC AGCCTTTCTG 
GTTATTGCTT TTCTCACCGG AACCGCCGGT GCGCTTCAGC TCCCTACGCT CAGCTTGTTT
TTGTCGACGG AAGTACAGGC TCGCCCGTTT ATGGTCGGGC TGTTTTATAC CGGCAGCGCC
GTCATCGGCA TTGTGGTCAG CCAAATTCTG GCGGCATATT CCGATCGTAA AGGCGATCGC
AAAATATTGA TCCTGCAATG TTGCCTATTG GGCGCGCTGG CCTGTCTGCT GTATGCCTGG
AACCGCAACT ATTTCGTCTT GTTGTTTATC GGCGTACTGC TGTCCAGCTT CGGTTCCACC
GCTAATCCGC AACTGTTCGC ACTGGCGCGG GAGCATGTCG ACCGCACCGG TCGCGAAGCC
GCTATGTTCA CGTCTATCAT GCGTGCCCAA ATTTCGCTGG CCTGGGTCAT CGGCCCGCCA
GCCGCCTTTG CGCTGGCGCT GGGTTTCGGC TTTACGGCGA TGTACCTTAC CGCCGCCTCG
GTATTTGTGC TGTGCGGGGT ACTGGTCTGG CTGTTGCTGC CGTCTATGTC GAAATCGCAG
ATGAAAGCGG CGGCAGTGCT GGAGTCACCT CGTCGTCACC GCCGGGATAC GCTGTTGCTG
TTTATCGCCT GTACCCTGAT GTGGACTTGC AACGGCATTT ACCTCATCAA TATGCCGCTG
TATCTGGTGC ATGAACTGCA ATTACCGGAA AAACTGGCGG GCGTGATGAT GGGCACCGCC
GCCGGGCTGG AGATACCGGT CATGTTGCTG GCGGGGTGGC TGACAAAACG GCTTGGTAAG
CGCCGTTTGA TGCGGCTGGC CGTCGCCGCA GGGTTGATGT TTTACATCGG GCTGACGCTG
CTGAACACAT CATGGACGCT GCTGGCGCTG CAACTGCTGA ACGCTGTCTT CATCGGCATA
CTGGCGGGCA TGGGCATGCT CTACTTTCAG GATTTGATGC CGGGCCAGGC CGGTGCCGCC
ACCACGCTGT TTACCAACAC GACGCGCGTA GGCTGGATTA TCTCCGGTTC GCTGGCCGGT
TCCGTGGCTG AAATCTGGAG TTATCATGCC GGTTTTGCCA TCGCGGTGTT GATTCTGGCG
GGCGCGGCAT ACTGCATGTG GCGCATTCGC GACGTCTGA
 
Protein sequence
MPISASTTRR LPDLTASAFL VIAFLTGTAG ALQLPTLSLF LSTEVQARPF MVGLFYTGSA 
VIGIVVSQIL AAYSDRKGDR KILILQCCLL GALACLLYAW NRNYFVLLFI GVLLSSFGST
ANPQLFALAR EHVDRTGREA AMFTSIMRAQ ISLAWVIGPP AAFALALGFG FTAMYLTAAS
VFVLCGVLVW LLLPSMSKSQ MKAAAVLESP RRHRRDTLLL FIACTLMWTC NGIYLINMPL
YLVHELQLPE KLAGVMMGTA AGLEIPVMLL AGWLTKRLGK RRLMRLAVAA GLMFYIGLTL
LNTSWTLLAL QLLNAVFIGI LAGMGMLYFQ DLMPGQAGAA TTLFTNTTRV GWIISGSLAG
SVAEIWSYHA GFAIAVLILA GAAYCMWRIR DV