| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2310 |
|---|
| Symbol | |
|---|
| ID | 8086697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 2720489 |
|---|
| End bp | 2721352 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644836384 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002987916 |
|---|
| Protein GI | 242239735 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTCA CCCAACTACG TATGTTTTGT CTGGTTGCCG AAACGGGGTC GCTGGTGCGG
GCGGCAGCGC AATTGGAGCG TGTGCCGTCC AATCTGACAA CCCGGCTGCG TCAGTTGGAA
CAAGAGTTGG GTACCGATTT GTTCATCCGC GAGAAACAGC GCGTCCGGCT TTCTCCGGCC
GGGTACAATT TTTTGGGGTA CGCGCAAAAA ATCCTGTCGC TGAGCGATGA AGCGCTCAGT
TTGACCCACA ACGGCGAACC TTCCGGCCTG TTTCAGCTTG GCGTGGTGGA AAGCCTGCTG
CTGACCGAAC TGCCGCCGCT GCTGGCGCGT TATCACCAAC GCTACCCGTC GGTGAAAGTC
CATTTACATA CCGCGCCTTG CGCAACATTG ATAGAACGGG TTAACGCCGG GGAACTGGCC
GCCGCGCTGG TGACAGGCCC GGTTAATCAT CCGTCACTGC ACAGCTGCCC GATCTATGCC
CAACCGTTGT CGCTGGTGAC AGCACAGGCC ATCACCGACG CATCGACGCC AGAACAACTG
CGCCAGTCGC CGTTGCTGGT CTTTGCCAAT GGCTGCGGCT ACCGCCAGCA TCTGGAATCC
TGGTTCCGCG CCCAGGGTAT TACGCCGGCA CTGCTCGTTG AAGTGCCCTC CTATTCCGTG
TTGCTGGCCG CCGTTGCCGC AGGTAACGGC GCCGCCCTGG TTCCACAAAG CGTCCTGCAC
GCACTTCCTG CAGGTCGAAA CGTACAACCG CACTCATTGC CGCCAGGGGT CGCCGTTATC
GACACCTGGC TGGTGTGGCG CCAGGGGGCA TTCGGCCCCA ACGTAGAAGC CTTGAAAAAA
TTGATGATCG AAAGCGGCGC CTGA
|
|---|
| Protein sequence | MDLTQLRMFC LVAETGSLVR AAAQLERVPS NLTTRLRQLE QELGTDLFIR EKQRVRLSPA
GYNFLGYAQK ILSLSDEALS LTHNGEPSGL FQLGVVESLL LTELPPLLAR YHQRYPSVKV
HLHTAPCATL IERVNAGELA AALVTGPVNH PSLHSCPIYA QPLSLVTAQA ITDASTPEQL
RQSPLLVFAN GCGYRQHLES WFRAQGITPA LLVEVPSYSV LLAAVAAGNG AALVPQSVLH
ALPAGRNVQP HSLPPGVAVI DTWLVWRQGA FGPNVEALKK LMIESGA
|
|---|
| |