| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2303 |
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| Symbol | rimO |
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| ID | 8086690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 2710380 |
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| End bp | 2711783 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644836377 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_002987909 |
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| Protein GI | 242239728 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.941264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGTTA ACACCTTCGA TCCTTCACAA ACCACCACGT TGTCCGCGCC GCAAAAAGCG
CTGGCCGACC AGAACGACGA CACCGGCATG CCCTTGTCCC ATCGCATCGG TTTTATCAGC
CTGGGATGCC CGAAAAATCT GGTGGATTCC GAACGTATTC TGACCGAACT GCGTACCGAA
GGTTATCAGG TGGTGCCCAG CTACAACGAC GCCGATCTGG TGATCGTCAA TACCTGCGGC
TTTATCGACA GCGCCGTACA GGAGTCGCTG GAAGCTATCG GCGAAGCCCT GAACGAAAAC
GGTAAAGTGA TCGTCACCGG TTGTCTGGGC GCCAAAGAAA ACCAGATCCG CGAAGTGCAC
CCCAAAGTGC TGGAAATTAC CGGCCCCCAC AGCTATGAAC AGGTGCTGTC GCATGTGCAT
CACTATGTAC CGAAGCCGGA ACATAACCAG TTCACCAGCC TGACGCCGGC GCAGGGCGTG
AAACTGACGC CGCGCCATTA TGCATATCTG AAAATTTCCG AAGGCTGCGA TCACCGTTGC
ACCTTCTGCA TCATCCCGTC CATGCGCGGC GATCTGGACA GCCGCCCTAT CGGCGCCGTG
TTGGACGAAG CCCGGCGCCT GAAAGACGCC GGCGTGAAGG AACTGCTGGT GATCTCCCAG
GACACCTCTG CCTATGGCGC CGACGTCAAA CACCGCACCG GCTTTTGGAA CGGGCAGCCG
GTCAAAACCA GCATGGTGGA TTTGTGCGAA CAATTAGCCA CGCTGGGCAT CTGGGTACGG
TTGCATTATG TCTATCCGTA CCCACACGTC GATACGGTGA TCCCACTGAT GGCGGCGGGC
AAAATCCTGC CGTATCTGGA TATCCCGTTG CAGCACGCCA GCCCGAAAAT CCTCAAGCTG
ATGAAGCGTC CCGGCGCGGT CGAACGCACG CTGGAGCGCA TCAAACGCTG GCGCGAGATC
TGCCCGGAAC TGACGCTACG CTCGACCTTT ATCGTCGGCT TCCCTGGTGA AACGGAAGAA
GACTTCCAAA TGCTGCTCGA TTTTCTGACA GAAGCGCAGC TCGACCGCGT CGGCTGTTTC
AAATTCAGCC CGGTAGACGG CGCCGCCGCC AATGATTTGC CGGATCCGGT GCCGGAAGCG
GTCAAAGAAG ATCGCTACCA CCGCTTCATG CAGTTGCAGC AAGAGATTTC CGCCCGGCGT
TTGCAAGCCA AGGTCGGGCG CGAACTGAAA GTGCTGATCG ACGAGGTGGA TGAAGAAGGC
GCGATTGGCC GCAGCATGGC GGACGCGCCG GAAATCGACG GCGCGGTCTA CCTCAATGGC
GAAAAACGGG TGAACGTTGG CGATTTGGTG ACGGTCAGGA TTGAACACGC CGACGAATAC
GATTTGTGGG GGAGCCTGAT CTAA
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| Protein sequence | MTVNTFDPSQ TTTLSAPQKA LADQNDDTGM PLSHRIGFIS LGCPKNLVDS ERILTELRTE
GYQVVPSYND ADLVIVNTCG FIDSAVQESL EAIGEALNEN GKVIVTGCLG AKENQIREVH
PKVLEITGPH SYEQVLSHVH HYVPKPEHNQ FTSLTPAQGV KLTPRHYAYL KISEGCDHRC
TFCIIPSMRG DLDSRPIGAV LDEARRLKDA GVKELLVISQ DTSAYGADVK HRTGFWNGQP
VKTSMVDLCE QLATLGIWVR LHYVYPYPHV DTVIPLMAAG KILPYLDIPL QHASPKILKL
MKRPGAVERT LERIKRWREI CPELTLRSTF IVGFPGETEE DFQMLLDFLT EAQLDRVGCF
KFSPVDGAAA NDLPDPVPEA VKEDRYHRFM QLQQEISARR LQAKVGRELK VLIDEVDEEG
AIGRSMADAP EIDGAVYLNG EKRVNVGDLV TVRIEHADEY DLWGSLI
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