| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2293 |
|---|
| Symbol | |
|---|
| ID | 8086680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 2697409 |
|---|
| End bp | 2699097 |
|---|
| Gene Length | 1689 bp |
|---|
| Protein Length | 562 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644836367 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002987899 |
|---|
| Protein GI | 242239718 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2985] Predicted permease |
|---|
| TIGRFAM ID | [TIGR01625] AspT/YidE/YbjL antiporter duplication domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATAA ACGTCGCTGA TTTGTTAAAC GGGAATTACA TTTTGCTGCT GTTTGTGGTG
CTTAGCCTGG GCCTTTGTCT GGGAAAACTG CGGCTTGGCT CGGTACAACT CGGCAACTCC
ATCGGTGTAC TGGTGGTGTC GCTCCTGTTG GGCCAACAGC ATTTCGCCAT CAACACCGAA
GCGCTCAGTC TGGGTTTTAT GCTGTTCATT TTTTGCGTCG GCGTGGAGGC CGGCCCCAAC
TTCTTTTCCA TTTTCTTCCG CGACGGTAAA AACTACCTGA TGCTGGCGCT GGTGATGGTC
AGCAGCGCAT TGTTGCTCGC GCTGCTGTTG GGCAAGCTGT TCGGCTGGGG AATCGGGTTA
AGCGCGGGGA TGCTCGCCGG TTCCATGACA TCAACGCCGG TGCTGGTCGG CGCGGGCGAT
ACGCTGCGCA CCGCCTTCAC CGGCAACCCA TTACTTTCGG TCGAGCAGGA ACATCTGAGC
CTGGGCTATG CCCTGACCTA CCTTATCGGG CTCGTCAGCC TGATCTTCGG CGCCCGTTAT
CTACCCCGCT TGCAACATCA GGATCTACCG ACCAGCGCCC AGCAAATCGC CCGCGAGCGT
GGTCTGGACG CCGACAGTCA GCGCAAAATC TACCTGCCGA TCATCCGCGC CTATCGGGTC
GGCCCGGAGC TGGTCGCTTG GGCCGACGGT AAAAACCTGC GTGAACTCGG CATCTACCGC
CAGACCGGCT GCTACATTGA GCGCATCCGC CGCAACGGCA TCCTCGCCAC ACCGGATGGC
GATGCGGTAC TGCAACTGGG CGACGAAATC GCGCTGGTGG GATATCCGGA CGCGCATGCG
CGCCTGAACC CCAATTTTCG TGACGGCAAA GAAGTCTTCG AACGCGATTT GCTGGATATG
CGCATCGTTA CCGAAGAGAT TGTCGTAAAA AACCACAATG CCGTTGGCAA ACGCCTGAGC
CAGTTGAAGC TGACCGATCA CGGCTGCTTC CTGAATCGCA TCGTGCGCAG CCAGATTGAA
ATGCCGATCG ACGACAACGT CGTGCTCAAC AAAGGCGATG TGTTGCAGGT CAGCGGCGAT
GCCCGTCGCG TCAAAAGTAT CGCCGACCGG ATTGGCTTTA TTTCCATCCA CAGCCAGGTC
ACTGATTTGA TGGCCTTTTG TGCGTTTTTT ATCATCGGCA TCATGGTCGG GTTGGTCACG
TTCCAGTTCA GAAATTTCTC CTTCGGCATC GGCAATGCCG CCGGGTTGCT GTTTTCCGGC
ATCATGCTGG GGTTTCTGCG CGCCAACCAT CCGACCTTCG GCTATATACC GCAAGGCGCG
CTGAACATGG TGAAAGAGTT TGGCCTGATG GTTTTCATGG CCGGGGTTGG GCTCAGTGCG
GGCAACACCA TCAATACCAG TCTGGGGGAT ATTGGCATCC AGATGTTGCT GTCCGGCCTG
TTGGTCAGCT TGTTGCCGGT GGTGATTTGC TTCCTGTTCG GCGCTTATGT GCTACGCATG
AATCGGGCGT TGTTGTTCGG CGCCATCATG GGTGCCCGCA CCTGCGCGCC GGCCATGGAG
ATCATCAGTG ATGCTTCGCG GAGCAATATT CCGGCGTTGG GGTATGCCGG CACCTACGCC
ATCGCCAACG TCCTGCTGAC GCTGGCAGGT TCGCTGATCG TCATCATCTG GCCGCAATTG
CCCGGCTGA
|
|---|
| Protein sequence | MNINVADLLN GNYILLLFVV LSLGLCLGKL RLGSVQLGNS IGVLVVSLLL GQQHFAINTE
ALSLGFMLFI FCVGVEAGPN FFSIFFRDGK NYLMLALVMV SSALLLALLL GKLFGWGIGL
SAGMLAGSMT STPVLVGAGD TLRTAFTGNP LLSVEQEHLS LGYALTYLIG LVSLIFGARY
LPRLQHQDLP TSAQQIARER GLDADSQRKI YLPIIRAYRV GPELVAWADG KNLRELGIYR
QTGCYIERIR RNGILATPDG DAVLQLGDEI ALVGYPDAHA RLNPNFRDGK EVFERDLLDM
RIVTEEIVVK NHNAVGKRLS QLKLTDHGCF LNRIVRSQIE MPIDDNVVLN KGDVLQVSGD
ARRVKSIADR IGFISIHSQV TDLMAFCAFF IIGIMVGLVT FQFRNFSFGI GNAAGLLFSG
IMLGFLRANH PTFGYIPQGA LNMVKEFGLM VFMAGVGLSA GNTINTSLGD IGIQMLLSGL
LVSLLPVVIC FLFGAYVLRM NRALLFGAIM GARTCAPAME IISDASRSNI PALGYAGTYA
IANVLLTLAG SLIVIIWPQL PG
|
|---|
| |