| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2241 |
|---|
| Symbol | |
|---|
| ID | 8086628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 2636170 |
|---|
| End bp | 2637933 |
|---|
| Gene Length | 1764 bp |
|---|
| Protein Length | 587 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644836318 |
|---|
| Product | protein of unknown function DUF181 |
|---|
| Protein accession | YP_002987850 |
|---|
| Protein GI | 242239669 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1944] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00702] uncharacterized domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.173958 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGA CTTTTATCCC AGGCAAAGAC GCCGCCCTGG AAGATTCCAT CGCCCGTTTT
CAACGACAAC TCCAGGACCT GGGGTTCAAC ATCGAGGAAG CCTCATGGCT TAATCCGGTG
CCGAATGTCT GGTCGGTGCA TATCCGCGAC CGCGACTGCG CCTTATGTTT TACCAATGGT
AAGGGCGCGA CGAAAAAGGC AGCGCTGGCA TCTGCGTTGG GTGAATACTT CGAACGCTTG
TCCACCAACT ATTTTTTCGC CGACTTTTAT CTCGGCAACG CGATCGCCAA CAGCGACTTC
GTACATTATC CGGATGAAAA ATGGTTCGCC ATTCCCGATA ACGACAGCCT GCCTGCAGGC
ATTCTGGATG AACGCCTACA CCGCTTCTAC GATCCAGACC AACAATTAAC CGCCAGCGAA
CTGGTGGATT TGCAGTCCGG CAACGCCGAA CGCGGTATCT GCGCCCTGCC TTTTACCCGT
CAGTCTGATC ATCAGACGGT GTACATTCCG ATGAACATCA TCGGCAACCT GTACGTTTCC
AACGGGATGT CTGCGGGCAA CACCCGTAAT GAAGCCCGCG TACAGGGTCT GTCGGAAGTT
TTCGAACGCT ACGTAAAAAA CCGGATCATC GCCGAGGCCA TCAGCCTGCC GGAAATTCCA
TCCGACGTAC TGGCACGTTA CCCCGGCGTG GTTGAAGCCA TCGCCACATT GGAACAGGAA
GGATTCCCGA TCTTCGCTTA CGACGCCTCG CTCGGCGGCC GTTATCCGGT GATTTGCGTG
GTACTGTTCA ATCCCGCCAA CGGCACCTGT TTCGCCTCGT TCGGCGCGCA TCCGGATTTC
GGCGTCGCAC TGGAACGTAC CGTGACCGAG CTGCTGCAAG GACGCGGGCT GAAAGATCTG
GACGTTTTCA CGCCCCCGAC CTTCGATAAC GACGAAGTGG CGGAGCACAC CAATCTGGAA
ACGCATTTCA TCGATTCCAG CGGTCTGATC TCCTGGGATT TGTTCCGTAA AACAGCCGAT
TATGCGTTTG CGGACTGGAG CTTCAGCGGC ACGACCGAAC AGGAGTTCGC CACCCTGATG
GCGATCTTCC GGCAGGAAGA TAAAGAAGTG TATATCGCGG ATTATGAACA TCTTTCCGTC
TATGCTTGCC GCATTCTGGT GCCGGGTATG TCGGATATTT ACCCGGAGGA AGATCTGCTG
CTGGCCAACA ACAGCATGGG TGCGCATCTG CGCGACACCT TGCTGGCGCT GCCAGACAGC
CAATGGGAGC AAGGCGAATA TCTGAATTTG CTGCAACAGT TGGATGACGA AGGTCTGGAC
GATTTTACCC GCGTGCGTGA ACTGCTGGGC ATCGCCACCG GCAAAGATAA CGGGTGGTTT
ACTTTGCGCG TCGGCGAGCT GAAATCCATG CTGGCGTTGG CGGGCGGCGA TCTGGAACAG
GCGCTGAGTT GGGCGGAATG GTCGCTCGAT TTTAATCAGT CCGTGTTCAG CGCCGAGCGC
GGCAACTACT ATCGTTGCCT GCAAACGCTG CTTCAACTGG CGCTGGAGCC TGAACGCGAA
CCGGCGTTGT ACTACGACGC TTTCGTGCGC ATGTATGGTC AGGACGCCGT CGACGCCGCC
AGCGCGGCGA TTACCGGCGA ACAAAGCTTC TACGGGCTGT TCGCCATTGA TAGTGATCTT
ACCGCCCTGA AAGCGCATCA GTCACTTTTA GCCGCCTACG AAAAATTGCA AAACGCCAAA
CGCCGACACT GGCAGAACGC CTAA
|
|---|
| Protein sequence | MTQTFIPGKD AALEDSIARF QRQLQDLGFN IEEASWLNPV PNVWSVHIRD RDCALCFTNG
KGATKKAALA SALGEYFERL STNYFFADFY LGNAIANSDF VHYPDEKWFA IPDNDSLPAG
ILDERLHRFY DPDQQLTASE LVDLQSGNAE RGICALPFTR QSDHQTVYIP MNIIGNLYVS
NGMSAGNTRN EARVQGLSEV FERYVKNRII AEAISLPEIP SDVLARYPGV VEAIATLEQE
GFPIFAYDAS LGGRYPVICV VLFNPANGTC FASFGAHPDF GVALERTVTE LLQGRGLKDL
DVFTPPTFDN DEVAEHTNLE THFIDSSGLI SWDLFRKTAD YAFADWSFSG TTEQEFATLM
AIFRQEDKEV YIADYEHLSV YACRILVPGM SDIYPEEDLL LANNSMGAHL RDTLLALPDS
QWEQGEYLNL LQQLDDEGLD DFTRVRELLG IATGKDNGWF TLRVGELKSM LALAGGDLEQ
ALSWAEWSLD FNQSVFSAER GNYYRCLQTL LQLALEPERE PALYYDAFVR MYGQDAVDAA
SAAITGEQSF YGLFAIDSDL TALKAHQSLL AAYEKLQNAK RRHWQNA
|
|---|
| |