| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2237 |
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| Symbol | rpsA |
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| ID | 8086624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | - |
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| Start bp | 2630651 |
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| End bp | 2632324 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644836314 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_002987846 |
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| Protein GI | 242239665 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000585516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAT CTTTTGCTCA ACTCTTTGAA GAATCCCTGA AAGAAATCGA AACCCGTCCG
GGTTCCATTG TCCGCGGTGT TGTGGTCGCT ATCGACAAAG ACGTCGTTCT GGTTGATGCC
GGCCTGAAAT CTGAATCTGC CATTCCGGTA GAGCAGTTCA AAAACGCCCA GGGTGAAATT
GAAATCCAGG TCGGTGATGA AGTTGACGTG GCTCTGGACG CGGTAGAAGA CGGCTTCGGT
GAAACCCTGC TGTCCCGTGA GAAAGCCAAA CGTCACGAAG CATGGCTGAT GCTGGAAAAA
GCTTACGAAG AATCCGCTAC TGTTACCGGT ATTATCAACG GCAAAGTGAA AGGTGGTTTC
ACCGTTGAGC TGAACGGTAT CCGTGCGTTC CTGCCGGGTT CTCTGGTAGA TGTGCGTCCG
GTTCGCGACA CTCTGCATCT GGAAGGCAAA GAGCTTGAGT TTAAAGTGAT CAAGCTGGAC
CAGAAACGCA ACAATGTGGT TGTTTCCCGT CGTGCCGTTA TCGAATCTGA AAACAGCGCC
GAGCGCGATC AGCTGCTGGA AAACCTGCAG GAAGGCATGG AAGTCAAAGG TATCGTCAAG
AACCTCACTG ACTACGGTGC ATTCGTTGAT CTGGGCGGCG TTGACGGTCT GCTGCACATC
ACTGACATGG CCTGGAAGCG CGTTAAGCAT CCGAGCGAAA TCGTCAATGT GGGCGACGAA
ATCACTGTCA AAGTGCTGAA GTTCGACCGC GAGCGTACTC GTGTCTCCCT GGGCCTGAAA
CAGCTGGGTG AAGATCCGTG GGTTGCTATC GCTAAACGTT ATCCGGAAGG CACCAAACTG
ACCGGTCGCG TCACCAACCT GACTGATTAC GGCTGCTTCG TAGAAATCGA AGAAGGCGTT
GAAGGTCTGG TACACGTTTC CGAAATGGAT TGGACCAACA AAAACATCCA TCCGTCCAAA
GTGGTTAATG TGGGCGACGT GGTTGAAGTC ATGGTTCTGG ATATCGATGA AGAACGTCGT
CGTATCTCCC TGGGCCTGAA ACAGTGCAAA GCCAACCCGT GGCAGCAGTT CGCTGAAACC
CACAACAAGG GTGATCGCGT AGAAGGCAAG ATCAAGTCCA TCACTGACTT CGGTATCTTT
ATCGGTCTGG ACGGTGGTAT TGATGGTCTG GTGCACCTGT CCGATATCTC CTGGAATGTA
GCTGGCGAAG AAGCTGTTCG CGAATACAAG AAAGGCGACG AAATCGCTGC GGTGGTTCTG
CAGGTTGACG CAGAGCGCGA ACGCATCTCC CTGGGCGTGA AACAGCTGGC TGAAGATCCG
TTCAACAACT ACCTGTCTGT AAACAAGAAA GGTGCGATTG TTACGGGTAA AGTCACTGCG
GTTGACGCCA AAGGTGCTAC AGTTGAATTA GCCGACGGCG TTGAAGGTTA TCTGCGTGCG
TCTGAAGCTT CTCGCGACCG TATTGAAGAT GCAACGCTGG TGCTGAACGT GGGTGATGAG
ATCGAAGCCA AATATACTGG TGTTGATCGT AAAAACCGTG TTGTAAGCCT GTCCATCCGT
GCCAAGGATG AAGCTGACGA GAAAGACGCT ATCGCTTCTG TTAATAACAA ACAGGAAGAA
GGCAATTTCT CCAACGCTAT GGCTGAAGCG TTCAAAGCTG CAAAAGGCGA GTAA
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| Protein sequence | MTESFAQLFE ESLKEIETRP GSIVRGVVVA IDKDVVLVDA GLKSESAIPV EQFKNAQGEI
EIQVGDEVDV ALDAVEDGFG ETLLSREKAK RHEAWLMLEK AYEESATVTG IINGKVKGGF
TVELNGIRAF LPGSLVDVRP VRDTLHLEGK ELEFKVIKLD QKRNNVVVSR RAVIESENSA
ERDQLLENLQ EGMEVKGIVK NLTDYGAFVD LGGVDGLLHI TDMAWKRVKH PSEIVNVGDE
ITVKVLKFDR ERTRVSLGLK QLGEDPWVAI AKRYPEGTKL TGRVTNLTDY GCFVEIEEGV
EGLVHVSEMD WTNKNIHPSK VVNVGDVVEV MVLDIDEERR RISLGLKQCK ANPWQQFAET
HNKGDRVEGK IKSITDFGIF IGLDGGIDGL VHLSDISWNV AGEEAVREYK KGDEIAAVVL
QVDAERERIS LGVKQLAEDP FNNYLSVNKK GAIVTGKVTA VDAKGATVEL ADGVEGYLRA
SEASRDRIED ATLVLNVGDE IEAKYTGVDR KNRVVSLSIR AKDEADEKDA IASVNNKQEE
GNFSNAMAEA FKAAKGE
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