| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2063 |
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| Symbol | mnmA |
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| ID | 8090660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 2444182 |
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| End bp | 2445294 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644836140 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_002987673 |
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| Protein GI | 242239492 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.558348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAGATA ACAGCCAGAA AAAAGTCATT GTCGGCATGT CCGGCGGCGT TGATTCATCC
GTTTCCGCCT ACCTGTTGCA ACAGCAAGGG TATCAGGTAG AAGGCCTGTT CATGAAGAAC
TGGGAAGAGG ATGACGATAC GGAATACTGT TCCGCTGCGG CCGATTTGGC CGATGCGCAA
GCAGTCTGCG ACAAACTGGG CATCGAACTG CACACCGTGA ATTTCGCCGC CGAATACTGG
GACAATGTCT TTGAGCATTT TCTTGCTGAA TACCGTGCCG GACGAACCCC AAACCCGGAC
ATCCTGTGCA ACAAGGAAAT CAAATTCAAA GCCTTTCTGG AGTTCGCCGC AGAGGATCTC
TGCGCAGACT ATATCGCCAC CGGGCACTAC GTGCGCCGGC AGGACATTGC CGGTAAAAGC
CGCTTGCTAC GTGGGTTGGA CAACAACAAA GATCAAAGTT ACTTCCTGTA TACGTTGAGT
CATGAGCAGG TGGCGCAAAG CCTGTTTCCG GTCGGCGAAC TTGAAAAACC GCAAGTCAGG
CGGATCGCGG AAGAACTGGA TTTGGCCACC GCCAAAAAGA AAGACTCCAC CGGCATCTGC
TTTATCGGCG AGCGCAAATT CCGTGACTTT CTGGCCCGCT ATCTGCCAGC GCAACCGGGC
GCCATTATTT CTGTCGACGA CGGCAAAACA ATGGGCGAAC ACCAGGGGCT GATGTACCAC
ACTTTGGGGC AGCGCAAAGG GTTAGGCATT GGCGGCGTCC GTGACGGCGG CGACGATCCC
TGGTACGTGG TCGATAAAGA TGTCGCCAAT AACATATTGT ATGTCGCCCA GGGGCACGAA
CATCCGCGTC TGATGTCGCA AGGCCTGATC GCCCAGCAGC TGCACTGGGT CGATCGCGAG
CCGCTGAGTC AACCGCAAAC CTGCACGGTG AAAACCCGTT ACCGGCAGGC GGATATCCCT
TGTACCTTGA CGCCGCTGGG TGAAGAACGG GTGGAAGTGC GTTTCGAGTC CCCCGTCGCG
GCGGTAACGC CGGGGCAATC CGCCGTGTTT TATCAGGGCG AAGTGTGCCT CGGCGGCGGC
ATCATTGAAG AGCGCTTTGG GCTGACCGCA TAA
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| Protein sequence | MSDNSQKKVI VGMSGGVDSS VSAYLLQQQG YQVEGLFMKN WEEDDDTEYC SAAADLADAQ
AVCDKLGIEL HTVNFAAEYW DNVFEHFLAE YRAGRTPNPD ILCNKEIKFK AFLEFAAEDL
CADYIATGHY VRRQDIAGKS RLLRGLDNNK DQSYFLYTLS HEQVAQSLFP VGELEKPQVR
RIAEELDLAT AKKKDSTGIC FIGERKFRDF LARYLPAQPG AIISVDDGKT MGEHQGLMYH
TLGQRKGLGI GGVRDGGDDP WYVVDKDVAN NILYVAQGHE HPRLMSQGLI AQQLHWVDRE
PLSQPQTCTV KTRYRQADIP CTLTPLGEER VEVRFESPVA AVTPGQSAVF YQGEVCLGGG
IIEERFGLTA
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