| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1954 |
|---|
| Symbol | |
|---|
| ID | 8090550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 2320418 |
|---|
| End bp | 2322061 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644836032 |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_002987566 |
|---|
| Protein GI | 242239385 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGACTA AAACAATTAA AAAGCGTTTG GCGATGGGAA TTGTCGCCGC ATTGACTGCG
TCAGCAGGCG TCAACGCCTG GGCGGCTACC GTACCCGCCG GTGTGCAACT GGCAGAGAAG
CAGGAGCTGG TACGTAATAA CGGCTCGGAA GTGGCTTCAC TGGATCCGCA TAAAATCGAA
GGCGTGCCCG AGTCCAACAT TGCTCGTGAT CTGCTGGAAG GGCTGTTGAT GGTGACGCCA
GACGGTCAGG TTGGGCCTGG CGTAGCGGAA AGCTGGGATA ATAAAGACTA CAAGGTCTGG
ACGTTCCATT TGCGTAAAAA TGCCAAATGG TCAAACGGCG ATCCGGTGAC GGCACAAGAT
TTCGTCTACA GCTGGCAGCG CATTTCCGAT CCGAAGACCG CCTCGCCTTA TGCCAGTTAC
CTGCAATTCG GCCATATCGT GAATATCGAT GATGTGGTTG CCGGCAAAAA ATCCCCCGAT
ACATTAGGCC TGAAAGCCAT TGATGACCAC ACGCTGGAAG TCACACTGAG TGAAGCGGTG
CCTTATTTCT ATAAGCTGCT GGTGCATCCG TCTACCTATC CGGTCAACAA GAACGTTGTC
GAGAAATTCG GCGATAAATG GACCCAACCC GAACACTGGG TCGGTAATGG CGCGTATAAA
CTGAAAGAGT GGGTCGTCAA CGAAAAGCTG GTGGTGGAAC GCAACCCGAA TTACTGGGAT
AACGCGCATA CGGTGATCAA TCAGGTCACT TTCCTGCCGA TTTCCTCTGA AGTGACGGAT
GTTAACCGTT ACCGCAGCGG TGAAATCGAT ATGAGCTATA CCAACCTGCC GATTGAGCTG
TTCCAGAAGC TGAAAAAAGA GATCCCGAAT GAAGTTAAGG TCAATCCTTA CCTTTGCACC
TACTATTACG AGATCAACAA CCAGAAACCG CCGTTTACCG ATGCGCGAGT CCGTCAGGCT
CTGATTCTGG GGTTGGATCA GGATATTTTG ACCAACAAGG TTAAAGGCCA GGGCGATACG
CCGGCGTTTG GTTTCACTCC GCCGTATATC GATGGTTTGG ACGGCAAACT GGCCGCGCCG
GAGTGGGTAA GCTGGTCGCG TGAAAAACGC AATGCGGAAG CGAAGAAATT GCTGGCTGAA
GCGGGTTTCA CCGCAGAGAA ACCGCTGACC CTCAATTTGC TGTACAACAC CTCTGATCTG
CACAAGAAAC TGGCGATTGC GGCTTCATCC ATTTGGAAAA ACAATATCGG TGTGGATGTC
AAACTGGAAA ACCAGGAGTG GAAAACCTTC CTGGACAGTC GTCATCAGGG AACCTTTGAC
ATCGCGCGGG CCGGTTGGTG TGCTGACTAT AACGAGCCGT CAACCTTCCT GAACATCATG
ATTTCCGACA GCAGCAGCAA CACTGCGCAC TATAAAAGCC CGGCTTTCGA TCAACTGATG
GCCAACGCGT TGGTGGCGAA GACCGATGCC GAACGTTCCG ATGCCTACAA ACAGGCGGAA
ACCCTGCTGG AGAAAGAGGG GGCGATCGTT CCGGTTTACT ATTATGCCAA CACCCGTCTG
GTGAAACCTT ATGTCGGCGG TTTAACCGGC AAAGATCCGC TGGATAATCT CAAAGATAAA
GATCTCTATA TTATCAAGCA TTAA
|
|---|
| Protein sequence | MVTKTIKKRL AMGIVAALTA SAGVNAWAAT VPAGVQLAEK QELVRNNGSE VASLDPHKIE
GVPESNIARD LLEGLLMVTP DGQVGPGVAE SWDNKDYKVW TFHLRKNAKW SNGDPVTAQD
FVYSWQRISD PKTASPYASY LQFGHIVNID DVVAGKKSPD TLGLKAIDDH TLEVTLSEAV
PYFYKLLVHP STYPVNKNVV EKFGDKWTQP EHWVGNGAYK LKEWVVNEKL VVERNPNYWD
NAHTVINQVT FLPISSEVTD VNRYRSGEID MSYTNLPIEL FQKLKKEIPN EVKVNPYLCT
YYYEINNQKP PFTDARVRQA LILGLDQDIL TNKVKGQGDT PAFGFTPPYI DGLDGKLAAP
EWVSWSREKR NAEAKKLLAE AGFTAEKPLT LNLLYNTSDL HKKLAIAASS IWKNNIGVDV
KLENQEWKTF LDSRHQGTFD IARAGWCADY NEPSTFLNIM ISDSSSNTAH YKSPAFDQLM
ANALVAKTDA ERSDAYKQAE TLLEKEGAIV PVYYYANTRL VKPYVGGLTG KDPLDNLKDK
DLYIIKH
|
|---|
| |