Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_1951 |
Symbol | oppD |
ID | 8090547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 2317274 |
End bp | 2318263 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644836029 |
Product | oligopeptide transporter ATP-binding component |
Protein accession | YP_002987563 |
Protein GI | 242239382 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAATA TGTCAGAAAA TCGCGAAGCG CTGCTTAACG TCAATGATTT ACGAGTCACC TTTGCTACGC CGGACGGTGA TGTCACCGCG GTCAACGACC TGAACTTTTC ACTGAGCGCC GGCGAAACGC TGGGGATTGT CGGCGAATCC GGGTCGGGTA AGTCGCAAAC GGCATTTGCG CTGATGGGGC TGCTGGCGGC CAATGGCCGG ATTGGCGGAT CGGCGCGCTT CAATGGGCGT GAAATCCTGA ATCTGCCGGA GCGCGAGCTC AACCTGCTGC GGGCAGAAGA AATCGCAATG ATTTTTCAGG ATCCGATGAC TTCGCTCAAC CCTTATATGC GGGTCGGCGA GCAGCTGATG GAAGTGTTGA TGCTGCACAA AAAGCTCGGC AAAGCGGAAG CATTCGAAGA GTCGGTGCGC ATGTTGGATG CGGTGAAAAT GCCGGAAGCC AGAAAGCGGA TGCGTATGTA TCCCCATGAA TTTTCAGGCG GTATGCGGCA GCGTGTGATG ATAGCGATGG CATTGTTGTG CCGTCCGAAG TTGCTGATTG CTGATGAGCC CACCACGGCA CTGGATGTGA CGGTTCAGGC GCAGATTATG ACGCTGCTTA ACGAACTGAA GCGCGAATTC AATACCGCCA TCATCATGAT CACCCATGAT TTGGGCGTTG TTGCCGGTAT CTGCGACAAA GTGCTGGTGA TGTATGCCGG GCGAACGATG GAATACGGCT CCGCGCAGGA GATCTTCTAC CAGCCGACCC ACCCTTACTC CATCGGCCTG CTCAAAGCGG TGCCGCGACT GGATGAAGAA AACGAGGAAC TGGCGACGAT CCCAGGCAAT CCGCCGAACC TGCTGCGTTT GCCCGCCGGA TGTCCGTTCC AGCCGCGTTG CCCGTATGCC CAGGAACAAT GCCATCAGGC GCCTACATTG ACGCCGTTTG GTCAGGGGCG CCTGCGCGCC TGTTTCCGCA GCGTGGAGGA ATTGGCATGA
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Protein sequence | MMNMSENREA LLNVNDLRVT FATPDGDVTA VNDLNFSLSA GETLGIVGES GSGKSQTAFA LMGLLAANGR IGGSARFNGR EILNLPEREL NLLRAEEIAM IFQDPMTSLN PYMRVGEQLM EVLMLHKKLG KAEAFEESVR MLDAVKMPEA RKRMRMYPHE FSGGMRQRVM IAMALLCRPK LLIADEPTTA LDVTVQAQIM TLLNELKREF NTAIIMITHD LGVVAGICDK VLVMYAGRTM EYGSAQEIFY QPTHPYSIGL LKAVPRLDEE NEELATIPGN PPNLLRLPAG CPFQPRCPYA QEQCHQAPTL TPFGQGRLRA CFRSVEELA
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