| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1911 |
|---|
| Symbol | araG |
|---|
| ID | 8090507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 2274627 |
|---|
| End bp | 2276147 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644835989 |
|---|
| Product | L-arabinose transporter ATP-binding protein |
|---|
| Protein accession | YP_002987523 |
|---|
| Protein GI | 242239342 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.389706 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAT CGCCCTATTT ATCGTTTCAC GGCATAGGCA AAACATTTCC CGGCGTAAAG
GCGCTGGATG ACATCAGTTT CGACTGCCAG GCCGGGCAAA TTCATGCGCT GATGGGGGAG
AACGGGGCAG GAAAATCCAC GTTGCTGAAA ATTCTGAGCG GCAACTATGC CCCTTCGCAG
GGGGAAATTC ATATCAAAGG GCAACCGGTG CGCTTCAACA ATACCATGGA AGCGCTAAAC
GCCGGTGTCG CCATTATCTA TCAGGAACTG CATCTGGTAC CGGAAATGAC GGTGGTCGAA
AACATCTATC TGGGGCAGTT GCCGCACAAA AGCGGCATCG TGAATTATTC GTTGCTGCGT
TACGAATCCC GCCTGCAACT GGAACATCTG GGGCTGGATA TCGACCCGGA TACCCCGTTG
AAATACCTCT CCATCGGCCA GTGGCAGATG GTGGAGATCG CCAAGGCGCT GGCGCGCAAC
GCCAAGATCA TTGCGTTCGA CGAGCCCACC AGTTCGCTTT CCGCCCGTGA GATTGAACAG
TTGTTTCGTG TGATCCGGGA GTTGCGGGCC GAAGGCCGGG TCATCCTGTA TGTGTCCCAT
CGCATGGAGG AGATTTTCAC CCTCAGCGAC GCGATTACCG TGTTCAAAGA CGGCCGCTAT
GTGAATACTT TCGACGATGT GGCGCAGGTG AGCCATGAGC AATTGGTGCA GGCGATGGTC
GGCCGCAATA TCGGCGATAT TTACGGTTAT GCGGCGCGGC CGCATGGCGA AGAACGTCTG
GTGCTGCGCG AGGTCAAGGC CACGGGCGTG AAATCGCCGG TATCGCTCAG CGTGCGCAGC
GGGGAGATCG TCGGCCTGTT CGGGCTGGTG GGCGCAGGGC GCAGCGAGTT GATGAAAGCG
TTGTTCGGCG CCACCGCCAT GACCGGCGGC GAGGTGCTGC TGGATGGCCA TCCCTTCCAT
GCTCGCACGC CCGGCGCCGC GATCCAGGCC GGGCTGATGC TGTGCCCGGA AGATCGCAAA
GCCGACGGTA TCATTCCGGT GCACTCGGTA CGGGACAATA TCAACATCAG CGCCCGTCGC
AAACATATCA AAGGCGGTTT CATCATTAAT GAGCCGTGGG AAGAAGCGAA CGCCGAGCGT
CATATCCAGT CATTGAATAT CAAGACGCCC TCGGCGGAGC AATTGATCAT GAATCTGTCC
GGCGGCAACC AGCAGAAGGC CATTTTGGGG CGTTGGTTAT CGGAGGAGAT GAAAGTCATC
ATGCTGGACG AGCCGACGCG CGGCATTGAT GTAGGCGCCA AGCACGAAAT TTACCATGTG
ATTTATGAAC TGGCCCGTCA GGGTATTGCG GTGTTGTTCG CCTCCAGCGA CCTGCCTGAA
GTGCTGGGGT TGGCGGATCG CATCGTGGTC ATGCGTGAGG GCGCCGTCTC CGGCGAGCTG
TCGCACGATG AGGCCAGCGA ACAGAAGGTC CTGAGTCTGG CGATGTTGAA AACGACCGCC
ACTGAACCCG CGGTTGCCTG A
|
|---|
| Protein sequence | MTASPYLSFH GIGKTFPGVK ALDDISFDCQ AGQIHALMGE NGAGKSTLLK ILSGNYAPSQ
GEIHIKGQPV RFNNTMEALN AGVAIIYQEL HLVPEMTVVE NIYLGQLPHK SGIVNYSLLR
YESRLQLEHL GLDIDPDTPL KYLSIGQWQM VEIAKALARN AKIIAFDEPT SSLSAREIEQ
LFRVIRELRA EGRVILYVSH RMEEIFTLSD AITVFKDGRY VNTFDDVAQV SHEQLVQAMV
GRNIGDIYGY AARPHGEERL VLREVKATGV KSPVSLSVRS GEIVGLFGLV GAGRSELMKA
LFGATAMTGG EVLLDGHPFH ARTPGAAIQA GLMLCPEDRK ADGIIPVHSV RDNINISARR
KHIKGGFIIN EPWEEANAER HIQSLNIKTP SAEQLIMNLS GGNQQKAILG RWLSEEMKVI
MLDEPTRGID VGAKHEIYHV IYELARQGIA VLFASSDLPE VLGLADRIVV MREGAVSGEL
SHDEASEQKV LSLAMLKTTA TEPAVA
|
|---|
| |