| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1844 |
|---|
| Symbol | |
|---|
| ID | 8090440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 2195728 |
|---|
| End bp | 2196708 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644835927 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_002987461 |
|---|
| Protein GI | 242239280 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TCCTTATTAT CGTTCCCGAC GGCGGCTTGC TGTTCGAATC CACCGGTATC
GCCGACATTC TGATACAGGC GAATCTGCTG TATGCGGAAG GTTTAGCCCG CCCGCGTTAC
CAGGTCGATA TCGCGACAAC GCAACCCCAT CAGGTGATCC ACGGAAGATC GGGGTTAAAC
CTGCTGGCTG ACCATCGCCT TCATGAGCTG GATCCTCGCG ACCCCCTCGA CACGGTCATC
ATTACCGGCC GGGGGCAAAG TGAACAGGAA GACGCCGCCG TCGTCGACTG GCTGCGCCTC
GCCGCGCCTC ATGCACGCCG TATTGTTTCA ATTTGCGGCG GTGCGATGCT GTTGGCGCAG
ACCGGGCTGC TTAACGGACG ACGGGCGACG ACGCACTGGA AATTGCTGGA GACCATGCAG
TCAACCTTCC CGGATGTAAA AGTTGAAGGC GGGCCGCTGT ATATTCAGGA TGGCCCGATC
TGGACATCCG GCGGAGCCAG TTCCGGTTTT GATTTGACGC TGGCACTGGT TGAAGAGGAC
TACGGTTTTA GCCTGGCCCG CGATGTCGCG CAGGACTTGG TGATGTATCT GCGCCGCCCC
GGCGGTCAGT TACAGTTCAG TCGTTACCAT TTACAGCCCC CCAACGGCTC CGGCCCGATC
AGCGATTTAC AGGCATGGCT GCTTGAAAAT ATCACTGCCG ACCTTTGCGT TGACGCATTG
GCGGAAAAAG TCGCCATGAG TCCACGTAAT TTCACCCGCG TTTTTACCCG TGAAACCGGC
GTTTCTCCGG CGCGCTATGT CGCCGAAGCG CGCCTGGCCG CCGCCCGGCA GCGTCTGGAG
CAAACCACCG ATACGCTGGA CAACATTGCC CTGCAAACGG GCTTTGGCAA CAGCATCAAC
CTCCGCCGTA TCTTTGAGAA ACAGCTCCAC CTGACGCCGG GAGAATATCG CCAGCGCTTT
CATTGCTGCA AAATGGCGTA A
|
|---|
| Protein sequence | MKKILIIVPD GGLLFESTGI ADILIQANLL YAEGLARPRY QVDIATTQPH QVIHGRSGLN
LLADHRLHEL DPRDPLDTVI ITGRGQSEQE DAAVVDWLRL AAPHARRIVS ICGGAMLLAQ
TGLLNGRRAT THWKLLETMQ STFPDVKVEG GPLYIQDGPI WTSGGASSGF DLTLALVEED
YGFSLARDVA QDLVMYLRRP GGQLQFSRYH LQPPNGSGPI SDLQAWLLEN ITADLCVDAL
AEKVAMSPRN FTRVFTRETG VSPARYVAEA RLAAARQRLE QTTDTLDNIA LQTGFGNSIN
LRRIFEKQLH LTPGEYRQRF HCCKMA
|
|---|
| |