| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1753 |
|---|
| Symbol | |
|---|
| ID | 8090349 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 2085788 |
|---|
| End bp | 2087095 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644835837 |
|---|
| Product | sensor protein RstB |
|---|
| Protein accession | YP_002987371 |
|---|
| Protein GI | 242239190 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.280951 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAAGC TGTTTATTCA ATTCTTTCTG CTGCTGTTCG CCAGCTTTCT GGTCATGACT
CTGCTGGTCG GTCTGGTCTA CAAGGTGACG GCCGAGCGCG CCGGACGTCA ATCCATGGAT
GACCTGATGA AAAGCTCGCT GTATCTGATC CGTAATGAGC TGCGCTCTAT CCCACCTCGC
GAATGGCACA AAACCATCAA CCAGATGGAT CTTAACCTGT CATTCAAGCT GCATATCGAA
CCCATCAACA AATACCGGCT CAGCACCCAG GCGCAGCAAC GGCTGATTCA GGGGGAGATC
GTCGCACTGG ACGATGAATA CACGTTTATC CAGCGCATTC CCCGCAGCCA CTACGTGCTG
GCCGTCGGCC CGATCCCGTA TCTGTTCTTC CTGCATGAAA TCCGGCTGGT CAACCTGCTG
GTACTGGCGT TGATTGGGCT GTCGCTGGCA TTGCCGGTTT TTCTGTGGAT GCGGCCGCAC
TGGAAAGCGA TGCTGCAGTT AGAAAATGCT GCCCAGCGGC TGGGGGAAGG TCATCTTGAA
GAACGCACCC ACTTCGACAA CACCTCTAAT CTGTTTCGAC TTGGGGTCGC TTTCAACCGG
ATGGCGGATA ACCTCAACCA GCTCATCACC AGCAAGAAAC AGCTTATCGA CAACATCGCC
CACGAACTAC GCACACCGTT GGTGAGGCTG CGTTACCGTC TGGCGATGAA TGAAAACCTG
ACCAGCGACG AAGAGGAGGC CATCAACCGG GATGTGGGCC AACTGGAAGC GCTGATCGAC
GAACTGTTGA CTTACGCCCG GCTGGATCGC CCGCAGGTCA CGCTGCATCT GGAAGAGATT
GCGCTACCCG GCTGGCTGCA GGGGCGCATC GCCGATTTTC AACTGGTCAA TGCCACCCGG
CAGATCACAC TGGAAGTCAA CCCTGCCAGC CAATTTGGTT ATGTGGATTT ACGCCTGCTC
GAGCGTGTGT TGAATAACCT GGTCAATAAC GCATTGAGAT TCTGCCGGCA GCAGATGCGC
GTCAGTCTGA CTCGTGAACA GGACATGGCC TGCCTGACGG TGGAAGACGA TGGCCCCGGT
ATTGCGCCGG CGGATCGCGA ACACATTTTC GAACCCTTTA TCCGACTGGA AGCCGGTATT
GAAAACAGCA GCGGAGGATG CGGCCTGGGG TTGGCAATCG TGCAGGCGAT TGTACGCGCC
TACGGCGGGA CGATTTTCGT CGAAAGCAGC GTACTTGGCG GCGCCCGCTT TGTATTCCGC
TGGCCGATCA TCACCCAAAA ACCCGACCTG CCGCGTCGTA CAGAGTAG
|
|---|
| Protein sequence | MRKLFIQFFL LLFASFLVMT LLVGLVYKVT AERAGRQSMD DLMKSSLYLI RNELRSIPPR
EWHKTINQMD LNLSFKLHIE PINKYRLSTQ AQQRLIQGEI VALDDEYTFI QRIPRSHYVL
AVGPIPYLFF LHEIRLVNLL VLALIGLSLA LPVFLWMRPH WKAMLQLENA AQRLGEGHLE
ERTHFDNTSN LFRLGVAFNR MADNLNQLIT SKKQLIDNIA HELRTPLVRL RYRLAMNENL
TSDEEEAINR DVGQLEALID ELLTYARLDR PQVTLHLEEI ALPGWLQGRI ADFQLVNATR
QITLEVNPAS QFGYVDLRLL ERVLNNLVNN ALRFCRQQMR VSLTREQDMA CLTVEDDGPG
IAPADREHIF EPFIRLEAGI ENSSGGCGLG LAIVQAIVRA YGGTIFVESS VLGGARFVFR
WPIITQKPDL PRRTE
|
|---|
| |