Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_1729 |
Symbol | |
ID | 8090325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 2055760 |
End bp | 2057328 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644835814 |
Product | DNA-binding transcriptional regulator TyrR |
Protein accession | YP_002987348 |
Protein GI | 242239167 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG3283] Transcriptional regulator of aromatic amino acids metabolism |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.52273 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTCTGG AAGTGTTTTG TCAGGACCGG CTCGGTCTGA CTCGTGAATT GCTGGATCTA CTGGTACTGC GCCATATTGA TTTGCGTGGT ATCGAGATCG ATCCTGTCGG CCGAATCTAC CTGAATTTCG CGACGCTGCA TTTTGAGGAG TTCAGCGCGC TGATGGCGGA AATTCGCCGC ATTCCGGGCG TTAGCGATGT CCGCACCATC GCCTTTATGC CGTCGGAGCG TGAGCATCGG GCGCTCAGTG CATTGCTGGA GTCGATGCCC GAGCCGGTGT TATCGGTGGA TCTGAAAGGC AAGCTGGAAC TGGTCAACGC CGCCGCGCTG ACATTGTTCG AGTTGACACG GGATAAAGCC CGGGCCATGA CGTTGGGGCA ACTGGTGAAT GGCTACGCAA TCGCCCAGTG GCAGGAACTG GGCGGCAGGC CGGAAACCGT GCGGGTAGTG ATTCGCGGCC AGGATTTTTT GCTGGAGGTG ACGCCAGTAC ACCTGGAAGA CGACAACGGT AAACTGACGA CGGCCGGCGC GCTGGTGATG TTGCGATCAG CGGTACGCAT GGGGAGACAA CTGCAGGATA CGCCGGTTCA TGACGACCGG GAGTTCGAGC ATGTGGTGGC GGTAAGCCCG CGTATGCGCC AGGTGGTGGA ACAGGCACGC AAACTGGCGA TGTTGGATGC GCCGTTGCTG CTGATTGGCG AAACCGGCAC GGGCAAGGAT ATGCTGGCTC GAGCCTGCCA TCTACGTAGC AGCCGGGGTA AGAAACCCTT TTTGGCGCTC AACTGTGCCT CGCTGCCGGA TGATGTGATG GAAAGCGAAC TTTACGGCTA TGCGCCAGGC GCTTACCCCA ATGCGCTGGA AGGTAAGAAA GGGTTTTTCG AACAGGCTAA CGGTGGTTCG GTGCTGCTGG ACGAAGTGGG CGAGATGTCG CCCCAGATGC AGACTAAATT GCTGCGATTT CTCAACGACG GCACGTTCCG GCGTGTGGGG GAAGAGCATG AGGTTCACGT TGATGTTCGT GTGATCTGCG CTACCCAGAA AAATCTGCAG GATTTGGTGC AACGCGGGCT GTTTCGTGAG GATTTGTTCT ATCGTCTGAA TGTGTTGACG ATCAATTTGC CGCCCTTGCG CGAGTGTCCG ATGGACGTCA TGCCGTTGGT GGAATTGTTT GTCGCCCGTT TCGCCGATGA GCAGGGCATT GCGCATCCCC GTATCGCGCC GGAGGTGCGC GCTTTGTTGC CGCAGTATGG TTGGCCGGGC AATGTGCGCC AGTTAAAAAA TACTCTCTAT CGTGCATTGG CTCAGTTGGA AGGCCATGAA CTGCGTCTGG CGGATATCGA CCTGCCTGCA TTCCAGCATG ACGTCGCCCA CAGCGACGAG GTGCTGGAAG GGTCGCTGGA TGATATCAAT AAACGATTTG AGCGTTCGGT GTTGACCCGG CTGTATCAAA CTTACCCCAG CACCCGCAAA CTGGCGAAAA GGCTGGGGGT TTCTCATACC GCTATCGCCA ATAAATTGCG TGAATACGGT CTCAGCGGGC GTAAAAGCGT CGGCGATGAA GATGAGTGA
|
Protein sequence | MRLEVFCQDR LGLTRELLDL LVLRHIDLRG IEIDPVGRIY LNFATLHFEE FSALMAEIRR IPGVSDVRTI AFMPSEREHR ALSALLESMP EPVLSVDLKG KLELVNAAAL TLFELTRDKA RAMTLGQLVN GYAIAQWQEL GGRPETVRVV IRGQDFLLEV TPVHLEDDNG KLTTAGALVM LRSAVRMGRQ LQDTPVHDDR EFEHVVAVSP RMRQVVEQAR KLAMLDAPLL LIGETGTGKD MLARACHLRS SRGKKPFLAL NCASLPDDVM ESELYGYAPG AYPNALEGKK GFFEQANGGS VLLDEVGEMS PQMQTKLLRF LNDGTFRRVG EEHEVHVDVR VICATQKNLQ DLVQRGLFRE DLFYRLNVLT INLPPLRECP MDVMPLVELF VARFADEQGI AHPRIAPEVR ALLPQYGWPG NVRQLKNTLY RALAQLEGHE LRLADIDLPA FQHDVAHSDE VLEGSLDDIN KRFERSVLTR LYQTYPSTRK LAKRLGVSHT AIANKLREYG LSGRKSVGDE DE
|
| |