Gene Dd703_1729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1729 
Symbol 
ID8090325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp2055760 
End bp2057328 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content57% 
IMG OID644835814 
ProductDNA-binding transcriptional regulator TyrR 
Protein accessionYP_002987348 
Protein GI242239167 
COG category[K] Transcription
[E] Amino acid transport and metabolism 
COG ID[COG3283] Transcriptional regulator of aromatic amino acids metabolism 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.52273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCTGG AAGTGTTTTG TCAGGACCGG CTCGGTCTGA CTCGTGAATT GCTGGATCTA 
CTGGTACTGC GCCATATTGA TTTGCGTGGT ATCGAGATCG ATCCTGTCGG CCGAATCTAC
CTGAATTTCG CGACGCTGCA TTTTGAGGAG TTCAGCGCGC TGATGGCGGA AATTCGCCGC
ATTCCGGGCG TTAGCGATGT CCGCACCATC GCCTTTATGC CGTCGGAGCG TGAGCATCGG
GCGCTCAGTG CATTGCTGGA GTCGATGCCC GAGCCGGTGT TATCGGTGGA TCTGAAAGGC
AAGCTGGAAC TGGTCAACGC CGCCGCGCTG ACATTGTTCG AGTTGACACG GGATAAAGCC
CGGGCCATGA CGTTGGGGCA ACTGGTGAAT GGCTACGCAA TCGCCCAGTG GCAGGAACTG
GGCGGCAGGC CGGAAACCGT GCGGGTAGTG ATTCGCGGCC AGGATTTTTT GCTGGAGGTG
ACGCCAGTAC ACCTGGAAGA CGACAACGGT AAACTGACGA CGGCCGGCGC GCTGGTGATG
TTGCGATCAG CGGTACGCAT GGGGAGACAA CTGCAGGATA CGCCGGTTCA TGACGACCGG
GAGTTCGAGC ATGTGGTGGC GGTAAGCCCG CGTATGCGCC AGGTGGTGGA ACAGGCACGC
AAACTGGCGA TGTTGGATGC GCCGTTGCTG CTGATTGGCG AAACCGGCAC GGGCAAGGAT
ATGCTGGCTC GAGCCTGCCA TCTACGTAGC AGCCGGGGTA AGAAACCCTT TTTGGCGCTC
AACTGTGCCT CGCTGCCGGA TGATGTGATG GAAAGCGAAC TTTACGGCTA TGCGCCAGGC
GCTTACCCCA ATGCGCTGGA AGGTAAGAAA GGGTTTTTCG AACAGGCTAA CGGTGGTTCG
GTGCTGCTGG ACGAAGTGGG CGAGATGTCG CCCCAGATGC AGACTAAATT GCTGCGATTT
CTCAACGACG GCACGTTCCG GCGTGTGGGG GAAGAGCATG AGGTTCACGT TGATGTTCGT
GTGATCTGCG CTACCCAGAA AAATCTGCAG GATTTGGTGC AACGCGGGCT GTTTCGTGAG
GATTTGTTCT ATCGTCTGAA TGTGTTGACG ATCAATTTGC CGCCCTTGCG CGAGTGTCCG
ATGGACGTCA TGCCGTTGGT GGAATTGTTT GTCGCCCGTT TCGCCGATGA GCAGGGCATT
GCGCATCCCC GTATCGCGCC GGAGGTGCGC GCTTTGTTGC CGCAGTATGG TTGGCCGGGC
AATGTGCGCC AGTTAAAAAA TACTCTCTAT CGTGCATTGG CTCAGTTGGA AGGCCATGAA
CTGCGTCTGG CGGATATCGA CCTGCCTGCA TTCCAGCATG ACGTCGCCCA CAGCGACGAG
GTGCTGGAAG GGTCGCTGGA TGATATCAAT AAACGATTTG AGCGTTCGGT GTTGACCCGG
CTGTATCAAA CTTACCCCAG CACCCGCAAA CTGGCGAAAA GGCTGGGGGT TTCTCATACC
GCTATCGCCA ATAAATTGCG TGAATACGGT CTCAGCGGGC GTAAAAGCGT CGGCGATGAA
GATGAGTGA
 
Protein sequence
MRLEVFCQDR LGLTRELLDL LVLRHIDLRG IEIDPVGRIY LNFATLHFEE FSALMAEIRR 
IPGVSDVRTI AFMPSEREHR ALSALLESMP EPVLSVDLKG KLELVNAAAL TLFELTRDKA
RAMTLGQLVN GYAIAQWQEL GGRPETVRVV IRGQDFLLEV TPVHLEDDNG KLTTAGALVM
LRSAVRMGRQ LQDTPVHDDR EFEHVVAVSP RMRQVVEQAR KLAMLDAPLL LIGETGTGKD
MLARACHLRS SRGKKPFLAL NCASLPDDVM ESELYGYAPG AYPNALEGKK GFFEQANGGS
VLLDEVGEMS PQMQTKLLRF LNDGTFRRVG EEHEVHVDVR VICATQKNLQ DLVQRGLFRE
DLFYRLNVLT INLPPLRECP MDVMPLVELF VARFADEQGI AHPRIAPEVR ALLPQYGWPG
NVRQLKNTLY RALAQLEGHE LRLADIDLPA FQHDVAHSDE VLEGSLDDIN KRFERSVLTR
LYQTYPSTRK LAKRLGVSHT AIANKLREYG LSGRKSVGDE DE