| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1649 |
|---|
| Symbol | rlmL |
|---|
| ID | 8090243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 1943411 |
|---|
| End bp | 1945528 |
|---|
| Gene Length | 2118 bp |
|---|
| Protein Length | 705 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644835732 |
|---|
| Product | 23S rRNA m(2)G2445 methyltransferase |
|---|
| Protein accession | YP_002987268 |
|---|
| Protein GI | 242239087 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCTC TGTTTGCCAG CACGGCGCGT GGTTTGGAAG AACTGTTAAA AAGTGAACTC
GAGGCGCTGG GCGCGCAGGA CTGTACCGTA GTGCAGGGCG GCGTACATTT TCAGGGTGAC
GATCGCCTGC TTTATCAGGC GTTGATGTGG AGCCGTCTGG CGTCGCGCAT CTTGCTGCCA
CTCAAAGAAT TCAAGGTTTA CAGCGATTTA GATCTTTATC TGGGGGTGCA GTCGGTAGAC
TGGCCGACGG TGTTTGACGT CCGTAGTACC TTCGCCGTCA GCTTCACCGG CACCAATGAG
GATATTCGCA ACAGCCAGTA TGGTGCGTTG AAAGTCAAAG ATGCCATCGT CGACAGTTTC
AGCCGCAAAG TCGGGCAGCG TCCGGATGTG GCGCGCCAGC AACCGGATAT ACGTGTCAAT
GTCTTTCTGA ATAAGGAAAA GGCCACCCTG GCGCTGGATC TCAGCGGCGA GGGGCTGCAT
TTGCGCGGCT ATCGTGAAAT GGCAGGTCAG GCGCCGTTGA AAGAAACCTT GGCGGCAGCC
ATTGTGCTGC GTTCCGGCTG GAAAGCGGGA ACGCCGATGG TGGATCCGAT GTGCGGCTCC
GGCACCTTGC TGATTGAAGC GGCGATGATG GCCTCGGATC GTGCGCCGGG GCTGACGCGC
CAGCACTGGG GGTTCCTTGC CTGGAGCCGT CACCAGCCTG AACTGTGGCA AAGCCTGGTG
GCCGAGGCGC AACAGCGTGC TCGTGCCGGC TTACCGGCAA CGACGTCGCG GTTCTTTGGC
TCCGATATTG ATGGCCGGGT GATCGATATC GCTCGCGCCA ATGCCCGCCG GGCGGGCGTG
GACTCGCTGA TCCGTTTTGA TGTGCAGGAT GCCGCCCGCC TGCAGAACCC GTTGCCGGCC
GGGCCGGTGG GTACCGTGCT CAGCAACCCG CCTTACGGCG AACGTCTGGA AAGCGAACCG
GCGCTGATTG CACTGCACAA CCTGTTGGGA CGCAAAATGA AAAGTGCGTT CGGCGGCTGG
CAATTGTCGC TGTTCAGCGC ATCGCCGGCG CTGCTCGATA GCCTTCAACT GCGTGCCGAT
CGTCAGTTCA AAGCGAAAAA CGGCCCCCTG GATTGTGTGC AGAAAAATTA TCGGTTGTCG
GAGAAAAGCA GCGACGCTGC GGCGCCGCTC GCGGAGGACT TTGCCAACCG CCTGAAAAAA
AATCTGCGCA AGCTGGAGAA ATGGGCCAGC CAGCAGGGTA TTGAATGCTA TCGGTTGTAC
GATGCCGACC TGCCGGAATA CAACGTGGCG GTGGATCGCT ACGGCAGTCG GGTGGTGATT
CAGGAATACG CGCCGCCGAA AAGTGTGGAT GAACAGAAAG CCCGTCAGCG GCTGTTTGAT
GTCATCAACG CCACGATTGC GGTGCTGAAT GTGCCCGCCA ACCAGTTGGT GCTGAAGACG
CGCGAGCGGC AGAAGGGTAA AAATCAATAC GAAAAACTGG CGGAGAAAGG TGAGTTTCTG
CAGGTGCGGG AGTTTGACGC TCACTTGTGG GTGAACCTGA CGGACTATCT GGATACCGGG
CTATTTCTGG ATCACCGCAT TGCCCGGCGG ATGCTGGGCG AAATGAGCCA AGACAAGGAT
TTCCTCAACC TGTTCGCTTA TACCGGCACT GCCAGCGTGC ATGCCGGCCT GGGCGGCGCG
CGCTCCACCA CGACGGTCGA TTTATCCCGT ACCTATCTGG AATGGGCGGA AAAGAACCTG
CGGCTTAACG GGTTGACCGG GCGGCAACAT CGTTTGATTC ATGCCGACTG TCTGGCCTGG
ATGCGTGATA CGCGCGAACA GTTCGATCTG ATTTTTATCG ACCCGCCCAC GTTTTCCAAC
TCCAAGCGGA TGGACGCCAC CTTCGACGTG CAGCGCGACC ATCTGGCGTT GATGAAAGAT
CTCAAGCGCA TACTGCGCCC TGGCGGTACC ATTATGTTTT CCAACAATAA ACGCGGTTTC
CAGATGGATC AGAACGGGCT GGCTGCGCTG GGGTTGACCG CGCAAGAGAT CACCGCGCGC
ACGCTTTCGC AGGATTTCGC CCGTAACCGT CAGATTCATA ACTGCTGGCT GCTGACGCAT
GCCGGAGAGG AAAAGTAA
|
|---|
| Protein sequence | MNSLFASTAR GLEELLKSEL EALGAQDCTV VQGGVHFQGD DRLLYQALMW SRLASRILLP
LKEFKVYSDL DLYLGVQSVD WPTVFDVRST FAVSFTGTNE DIRNSQYGAL KVKDAIVDSF
SRKVGQRPDV ARQQPDIRVN VFLNKEKATL ALDLSGEGLH LRGYREMAGQ APLKETLAAA
IVLRSGWKAG TPMVDPMCGS GTLLIEAAMM ASDRAPGLTR QHWGFLAWSR HQPELWQSLV
AEAQQRARAG LPATTSRFFG SDIDGRVIDI ARANARRAGV DSLIRFDVQD AARLQNPLPA
GPVGTVLSNP PYGERLESEP ALIALHNLLG RKMKSAFGGW QLSLFSASPA LLDSLQLRAD
RQFKAKNGPL DCVQKNYRLS EKSSDAAAPL AEDFANRLKK NLRKLEKWAS QQGIECYRLY
DADLPEYNVA VDRYGSRVVI QEYAPPKSVD EQKARQRLFD VINATIAVLN VPANQLVLKT
RERQKGKNQY EKLAEKGEFL QVREFDAHLW VNLTDYLDTG LFLDHRIARR MLGEMSQDKD
FLNLFAYTGT ASVHAGLGGA RSTTTVDLSR TYLEWAEKNL RLNGLTGRQH RLIHADCLAW
MRDTREQFDL IFIDPPTFSN SKRMDATFDV QRDHLALMKD LKRILRPGGT IMFSNNKRGF
QMDQNGLAAL GLTAQEITAR TLSQDFARNR QIHNCWLLTH AGEEK
|
|---|
| |