Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_1644 |
Symbol | |
ID | 8090238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 1938599 |
End bp | 1939579 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644835727 |
Product | aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein |
Protein accession | YP_002987263 |
Protein GI | 242239082 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.789892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGCAT CGTTCAAGGC CACGCTTTTC GCGCTGCTGG TCATTGGCTT ACCGGGCTTC ACGTCGGCGG CGCAATCCAC CAATACGCCA ACACCATCCA CCGATGCGCC GGCACAATTG CGCATCGGAT ACCAGAAAGG TTCGGTCAGC CTGGTACTGG CCAAGACCCA CCAGTTGCTG GAAAAACAGT TTCCTAACAC CCGCATCAGT TGGATTGAAT TCCCAGCCGG CCCGCAAATG CTGGAAGCGC TCAACATCGG CAGCATCGAT GTCGGCAGCA CCGGCGATAT TCCGCCATTG TTTGCACAGG CGGCCGGGGC CGATTTGGTT TACATCGGCG TAGAACCGCC GAAACCTAAA GCCGAAGTGA TTCTGGTCAA GAGCGAGAGC CCAATCAAAA CCGTCGCCGA CCTGAAAGGC CGCAAGGTCG CGTTCCAGAA AGGCTCCAGT TCCCATAATC TGCTGCTGCG CAATCTGCAA AAAGCCGGGC TGACGTTTAG CGACATTCAG CCGGCCTACC TGACGCCGGC CGATGCGCGC GCCGCCTTCC AGCAGGGTAA TGTCGATGCC TGGACGATCT GGGATCCGTA CTATTCCGCC GCGCTGCTGC AAGGCGGCGT GCGGGTGCTG GCCGACGGCA CCGACCTGAA TCTGACCGGT TCGTTTTATC TGGCCTCGCG TCGCTATGCC AAGACGTATG GCCCGTTTTT GCAGCAATTT CTTCATACCC TGACGCAGGC CGACGCATTA ACCATCAGCC AACGTCAACA GAGCATCACT CTGCTGGCTA ATGCGATGGG GTTGCCCGAG GCGGTGATCG GCAGCTATTT CGACCATCGC CCCATTACCC TCATCAGGCC GGTGGATGAA CGCACCTTGC AGGCGCAGCA GCGAACCGCT GATCTGTTCT ATGACAATCA CCTGATCCCC ACCCGGCTGG ATATCGCCAG CCGTATCTGG CGCGCCCCGA CAGCGCAATA A
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Protein sequence | MFASFKATLF ALLVIGLPGF TSAAQSTNTP TPSTDAPAQL RIGYQKGSVS LVLAKTHQLL EKQFPNTRIS WIEFPAGPQM LEALNIGSID VGSTGDIPPL FAQAAGADLV YIGVEPPKPK AEVILVKSES PIKTVADLKG RKVAFQKGSS SHNLLLRNLQ KAGLTFSDIQ PAYLTPADAR AAFQQGNVDA WTIWDPYYSA ALLQGGVRVL ADGTDLNLTG SFYLASRRYA KTYGPFLQQF LHTLTQADAL TISQRQQSIT LLANAMGLPE AVIGSYFDHR PITLIRPVDE RTLQAQQRTA DLFYDNHLIP TRLDIASRIW RAPTAQ
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