| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1618 |
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| Symbol | |
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| ID | 8090212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 1908580 |
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| End bp | 1909782 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644835701 |
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| Product | outer membrane-specific lipoprotein transporter subunit LolC |
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| Protein accession | YP_002987237 |
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| Protein GI | 242239056 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCAAC CTGTCGCGTT ATTTATCGGT TTGCGCTACA TGCGCGGCCG CGCCGCCGAT
CGTTTCGGAC GGTTTGTATC CTGGCTTTCC GCTATCGGTA TCACTCTCGG CGTGATGGCG
CTGGTCACTG TGCTTTCGGT GATGAATGGT TTTGAACAGG ATCTCGAAGA CAGCATTCTG
GGGCTGATGC CGCAGGCGCT GATCACCACG CCCCAGGGGT TTCTTGACCC GCAAACGCTT
CCCGCCCCGA CGCTGAATGC GCTCAAAGGC GTCACACAGA TTACGCCGTT GACCACCGGC
GACGTGGTAT TGCAGAGCGC CCGCAGCGTG GCGGTGGGGG TGATGCTCGG CGTCAATCCG
GAACAGCCGG AGCCGCTGGC GCGCTATCTG GTTAACGCCA GTATGCAAGC GCTGAAACCG
GGGGATTATC AGGTGATCCT CGGCGAGCAA TTAGCCGCAC AACTGGATGT TAAGCGCGGC
GATCAACTGC GGCTGATGGT GACTAGCGCC AGCCAACTGA CGCCGATGGG CCGTATTCCC
AGCCAACGTC TGTTTACCGT TGCGGGCACC TTTTACGCTC ACAGCGAGGT AGACGGTTAT
CAATTGTTGG TTAATCAGCA GGATGCCTCA CGATTGATGC GCTACCCGGC GGGGAATATT
ACCGGTTGGC GCTTGTCGCT GGCGCAACCG CTGGCGGTGG ATGTCCTGGC GCGTCAATCC
CTGCCGCAGG GGACGGTGTG GAAAGACTGG CGCGAGCGCA AAGGCGAGCT GTTTCAGGCG
GTGCGGATGG AGAAGAACAT GATGGGGCTG TTACTGAGCC TGATTGTGGC CGTCGCCGCG
TTCAACATTA TTACTTCACT GGGATTGCTG GTGATGGAAA AGCAGGGCGA GGTCGCGATC
CTGCAGACGC AGGGGCTGAC CCGGCGTCAG ATCATGACGG TGTTCATGGT GCAAGGCGGT
AGCGCCGGCG TGACCGGCGC GTTGTTGGGC GCGTTGCTGG GCGTGGCGCT GGCCAGTCAG
CTCAATACGC TGATGCCGGT GTTAGGGTTG CTGATCGATG GCGGTTCGCT GCCGGTGCAG
ATCCAACCGT TGCAGGTGGC TGGCATTGCG CTGGTGGCCA TGCTGCTGGC GTTGCTCTCC
ACGCTTTATC CTTCCTGGCG CGCCGCCGCC GTCCATCCCG CAGAGGCTTT ACGTTATGAA
TAA
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| Protein sequence | MYQPVALFIG LRYMRGRAAD RFGRFVSWLS AIGITLGVMA LVTVLSVMNG FEQDLEDSIL
GLMPQALITT PQGFLDPQTL PAPTLNALKG VTQITPLTTG DVVLQSARSV AVGVMLGVNP
EQPEPLARYL VNASMQALKP GDYQVILGEQ LAAQLDVKRG DQLRLMVTSA SQLTPMGRIP
SQRLFTVAGT FYAHSEVDGY QLLVNQQDAS RLMRYPAGNI TGWRLSLAQP LAVDVLARQS
LPQGTVWKDW RERKGELFQA VRMEKNMMGL LLSLIVAVAA FNIITSLGLL VMEKQGEVAI
LQTQGLTRRQ IMTVFMVQGG SAGVTGALLG ALLGVALASQ LNTLMPVLGL LIDGGSLPVQ
IQPLQVAGIA LVAMLLALLS TLYPSWRAAA VHPAEALRYE
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